Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334671.1 | Gene: | lrp1bb / 559293 | ZFINID: | ZDB-GENE-070912-401 | Length: | 4600 | Species: | Danio rerio |
Alignment Length: | 1669 | Identity: | 475/1669 - (28%) |
---|---|---|---|
Similarity: | 779/1669 - (46%) | Gaps: | 269/1669 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 EPYTKSAEIEPQLC----QVIDNNEDVTTKA------TKCTKSNSGVGWRQMLI---GFLLIC-- 53
Fly 54 ---FGISN----SWQYKNVHMPSS------------------------SSLIASPPASAFVNTPA 87
Fly 88 TLLFTTRHDIQVANITRPTGGPQIDVIVRDLAEAMAIDFYYAKNLVCWTDSGREII---ECAQTN 149
Fly 150 SSALQPLLRAPKQTVISTGLDKPEGLAMDWYTDKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQ 214
Fly 215 PRAVAVVPARKLLIWTDW-GEYPKIERASMDGDPLSRMTLVKEHVF--WPNGLAVDLKNELIYWT 276
Fly 277 DGKHHFIDVMRLDGSSRRTIVNN---LKYPFSLTFYDDRLYWTDWQRGSLNALDLQTRELKELID 338
Fly 339 -TPKAPNSVRAWDPSLQPYEDNPCAHNNGN--CSHLCLLATNSQGFSCACPTGVKLISANTCANG 400
Fly 401 SQEMMFIVQRTQISKISLDSPDYTIF-PLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHAD 464
Fly 465 GTGVTDFVTSEVRHPDGLALDWLARNLYWTDTVTD--RIEVCRLDGTARKVLIYEHLEEPRAIAV 527
Fly 528 APSLGWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVA 592
Fly 593 NMDGSGRRVV--ISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLK 655
Fly 656 VTRLREVRGQNACAVRNGGCSHLCL-NRPRDYVCRCAIDYELANDKRTCVVPAAFLLFSRQEHIG 719
Fly 720 RISIEYNEGNHNDERIPFKDVRDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQRIVDSGLI 784
Fly 785 GPDGIAVDWLANNIYWSDAEARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPRRGYMYWTE-SPT 848
Fly 849 DSIRRAAMDGSDLQTIV-AGANHAAGLTFDQETRRLYWATQSRPAKIESADWD-GKKRQILVGSD 911
Fly 912 MDEPYAVSLYQDYVYWSD--WNTGDIERVHKTTGQNRSLVHSGM-TYITSLLVFNDKRQTGVNPC 973
Fly 974 KVNNGGCSHLCL-AQPGRRGMTCACPTHYQLAKDGVSCIPPRNYIIFSQRNCFGRL-LPNTTDCP 1036
Fly 1037 NIPL-----PVSGKNIRAVDYDPITHHIYWIEGRSHS-------------IKRSLANGTKVSLLA 1083
Fly 1084 NSGQPFDLAIDIIGRLLFWTCSQSNSINVTSFLGESVG------VIDTGDSEKPRNIAVHAMKRL 1142
Fly 1143 LFWTDVGSHQ-AIIRARVDGNE-RVELAYKLEGVTALALDQQSDMIYYAHGK--RIDAIDINGKN 1203
Fly 1204 KKTLVSMHISQVINIAALGGFVYWLD-DKTGVERIT--VNGERR--SAELQRLP----------- 1252
Fly 1253 --QITDIR---------AVWTPDPKV----------LRNHTCMHSRTKCS-HI--------CI-- 1285
Fly 1286 -ASGEGIARTRD-------VC---SCPK------HLMLLEDKENCGAFPACGP-------DHFTC 1326
Fly 1327 AA-----------PVS-----------------------------GISD-------VNKDCIPAS 1344
Fly 1345 WRCDGQKDCPDKSDEVGCPT-----CRADQFSCQSGECIDKSLVCDGTTNCANGHDEADC---CK 1401
Fly 1402 RPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAP 1445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 19/38 (50%) |
NHL | 168..503 | CDD:302697 | 125/346 (36%) | ||
NHL repeat | 172..237 | CDD:271320 | 28/65 (43%) | ||
LY | 252..293 | CDD:214531 | 15/42 (36%) | ||
NHL repeat | 261..298 | CDD:271320 | 14/36 (39%) | ||
NHL repeat | 303..339 | CDD:271320 | 10/36 (28%) | ||
NHL repeat | 341..419 | CDD:271320 | 27/79 (34%) | ||
NHL repeat | 428..476 | CDD:271320 | 20/47 (43%) | ||
LY | 472..511 | CDD:214531 | 16/40 (40%) | ||
NHL repeat | 477..503 | CDD:271320 | 11/27 (41%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 13/38 (34%) | ||
LY | 558..599 | CDD:214531 | 14/40 (35%) | ||
LY | 600..641 | CDD:214531 | 8/42 (19%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 16/35 (46%) | ||
LY | 739..773 | CDD:214531 | 9/33 (27%) | ||
LY | 776..818 | CDD:214531 | 19/41 (46%) | ||
LY | 819..860 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 18/37 (49%) | ||
LY | 1122..1164 | CDD:214531 | 11/43 (26%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 13/67 (19%) | ||
LDLa | 1319..1362 | CDD:238060 | 20/96 (21%) | ||
LDLa | 1365..1399 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1399..1433 | CDD:197566 | 15/36 (42%) | ||
lrp1bb | XP_021334671.1 | LDLa | 38..76 | CDD:294076 | |
FXa_inhibition | 128..156 | CDD:317114 | |||
LY | 238..274 | CDD:214531 | |||
LY | 282..324 | CDD:214531 | |||
LY | 326..367 | CDD:214531 | |||
FXa_inhibition | 452..484 | CDD:317114 | |||
LY | 516..558 | CDD:214531 | |||
LY | 559..598 | CDD:214531 | |||
LY | 605..654 | CDD:214531 | |||
LY | 655..697 | CDD:214531 | |||
FXa_inhibition | 766..801 | CDD:317114 | |||
LDLa | 854..887 | CDD:238060 | |||
LDLa | 895..926 | CDD:197566 | |||
LDLa | 939..970 | CDD:238060 | |||
LDLa | 974..1005 | CDD:197566 | |||
LDLa | 1021..1056 | CDD:238060 | |||
LDLa | 1065..1099 | CDD:238060 | |||
FXa_inhibition | 1144..1180 | CDD:317114 | 8/35 (23%) | ||
FXa_inhibition | 1192..1220 | CDD:317114 | 1/27 (4%) | ||
LY | 1248..1289 | CDD:214531 | 10/40 (25%) | ||
LY | 1295..1337 | CDD:214531 | 20/41 (49%) | ||
LY | 1339..1382 | CDD:214531 | 18/44 (41%) | ||
LY | <1394..1427 | CDD:214531 | 14/32 (44%) | ||
Ldl_recept_b | 1586..1625 | CDD:278487 | 18/38 (47%) | ||
LY | 1609..1651 | CDD:214531 | 15/41 (37%) | ||
LY | 1653..1693 | CDD:214531 | 12/44 (27%) | ||
LY | <1703..1734 | CDD:214531 | 10/30 (33%) | ||
FXa_inhibition | 1806..1842 | CDD:317114 | 16/35 (46%) | ||
NHL | <1858..1941 | CDD:302697 | 26/84 (31%) | ||
NHL repeat | 1879..1916 | CDD:271320 | 9/36 (25%) | ||
LY | 1915..1955 | CDD:214531 | 19/39 (49%) | ||
Ldl_recept_b | 1976..2016 | CDD:278487 | 17/39 (44%) | ||
LY | 2001..2041 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 2115..2150 | CDD:317114 | 18/37 (49%) | ||
Ldl_recept_b | 2298..2339 | CDD:278487 | 10/40 (25%) | ||
LY | 2323..2365 | CDD:214531 | 7/41 (17%) | ||
FXa_inhibition | 2436..2470 | CDD:317114 | 6/33 (18%) | ||
LDLa | 2482..2511 | CDD:238060 | 6/28 (21%) | ||
LDLa | 2520..2554 | CDD:238060 | 5/33 (15%) | ||
LDLa | 2559..2593 | CDD:238060 | 5/33 (15%) | ||
LDLa | <2613..2642 | CDD:294076 | 11/28 (39%) | ||
LDLa | 2650..2684 | CDD:238060 | 14/33 (42%) | ||
LDLa | 2688..2719 | CDD:238060 | 14/32 (44%) | ||
LDLa | 2728..2761 | CDD:197566 | 2/4 (50%) | ||
LDLa | 2772..2804 | CDD:197566 | |||
LDLa | 2813..2846 | CDD:238060 | |||
LDLa | 2859..2893 | CDD:238060 | |||
cEGF | 2916..2939 | CDD:315355 | |||
EGF_CA | 2936..2969 | CDD:214542 | |||
LY | 3003..3047 | CDD:214531 | |||
LY | 3050..3086 | CDD:214531 | |||
LY | 3135..3174 | CDD:214531 | |||
FXa_inhibition | 3245..3281 | CDD:317114 | |||
LDLa | 3285..3316 | CDD:197566 | |||
LDLa | 3325..3359 | CDD:238060 | |||
LDLa | 3364..3399 | CDD:238060 | |||
LDLa | 3404..3439 | CDD:238060 | |||
LDLa | 3444..3478 | CDD:238060 | |||
LDLa | 3483..3517 | CDD:238060 | |||
LDLa | 3521..3555 | CDD:238060 | |||
LDLa | 3563..3597 | CDD:238060 | |||
LDLa | 3601..3636 | CDD:238060 | |||
LDLa | 3643..3675 | CDD:238060 | |||
LDLa | 3730..3765 | CDD:238060 | |||
Ldl_recept_b | 4008..4048 | CDD:278487 | |||
LY | 4032..4073 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590478 | |
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7812 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.640 |