DRSC/TRiP Functional Genomics Resources

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Protein Alignment arr and CG6553

DIOPT Version :10

Sequence 1:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster
Sequence 2:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster


Alignment Length:118 Identity:42/118 - (35%)
Similarity:53/118 - (44%) Gaps:24/118 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1339 DCIPASWRCDGQKDCPDKSDE-------VGCPTCRADQFSCQSGECIDKSLVCDGTTNCANGHDE 1396
            |||.....|||..:|.|.|||       |.||   ...|.|..|.||..:.||||..:|.:|.||
  Fly    40 DCIQLDQLCDGSANCLDGSDE
TVAMCEKVWCP---GYAFRCSYGACIASTAVCDGVQDCVDGSDE 101

  Fly  1397 -----------ADCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDIC 1438
                       |:|..  .|..|...: |::.:.||||..:|.||.||...:|
  Fly   102 QGWLCRAQMQQANCDN--WEMYCSSGQ-CMTYSKLCDGIRDCRDGDDELESLC 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320
NHL repeat 341..419 CDD:271320
NHL repeat 428..476 CDD:271320
LY 472..511 CDD:214531
NHL repeat 477..503 CDD:271320
Ldl_recept_b 534..574 CDD:459654
LY 558..599 CDD:214531
LY 600..641 CDD:214531
FXa_inhibition 668..703 CDD:464251
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060 12/29 (41%)
LDLa 1365..1399 CDD:238060 14/44 (32%)
LDLa 1399..1433 CDD:197566 11/33 (33%)
CG6553NP_610911.1 LDLa 34..60 CDD:197566 9/19 (47%)
LDLa 70..101 CDD:197566 13/33 (39%)
LDLa 115..146 CDD:197566 11/33 (33%)
Blue background indicates that the domain is not in the aligned region.

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