Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006238632.1 | Gene: | Lrp8 / 362558 | RGDID: | 1305729 | Length: | 1013 | Species: | Rattus norvegicus |
Alignment Length: | 405 | Identity: | 123/405 - (30%) |
---|---|---|---|
Similarity: | 199/405 - (49%) | Gaps: | 68/405 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 359 NPCAHNNGNCSHLCLLATNSQ-GFSCACPTGVKLISANTCAN----------------------- 399
Fly 400 -------------------GSQEMMFIVQRTQISKISLDSPDYT-IFPLPLGKVKYAIAIDYDPV 444
Fly 445 EEHIYWSDVETYTIKRAHADGTGVTD----FVTSEVRHPDGLALDWLARNLYWTDTVTDRIEVCR 505
Fly 506 LDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGI 570
Fly 571 ALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVI--SDNLKHLFGLSILDDYLYWTDWQRRSIDRA 633
Fly 634 HKITGNNRIVVVDQYPDLMGLKV-TRLREVRGQNAC---AVRNGGCSHLCLNRPR------DYVC 688
Fly 689 RCAIDYELANDKRTC 703 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | |
NHL | 168..503 | CDD:302697 | 49/191 (26%) | ||
NHL repeat | 172..237 | CDD:271320 | |||
LY | 252..293 | CDD:214531 | |||
NHL repeat | 261..298 | CDD:271320 | |||
NHL repeat | 303..339 | CDD:271320 | |||
NHL repeat | 341..419 | CDD:271320 | 23/102 (23%) | ||
NHL repeat | 428..476 | CDD:271320 | 12/51 (24%) | ||
LY | 472..511 | CDD:214531 | 13/38 (34%) | ||
NHL repeat | 477..503 | CDD:271320 | 10/25 (40%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 20/38 (53%) | ||
LY | 558..599 | CDD:214531 | 16/40 (40%) | ||
LY | 600..641 | CDD:214531 | 13/42 (31%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 15/43 (35%) | ||
LY | 739..773 | CDD:214531 | |||
LY | 776..818 | CDD:214531 | |||
LY | 819..860 | CDD:214531 | |||
FXa_inhibition | 973..1010 | CDD:291342 | |||
LY | 1122..1164 | CDD:214531 | |||
FXa_inhibition | 1273..1313 | CDD:291342 | |||
LDLa | 1319..1362 | CDD:238060 | |||
LDLa | 1365..1399 | CDD:238060 | |||
LDLa | 1399..1433 | CDD:197566 | |||
Lrp8 | XP_006238632.1 | LDLa | 44..78 | CDD:238060 | |
LDLa | 82..114 | CDD:197566 | |||
LDLa | 124..160 | CDD:238060 | |||
LDLa | 203..235 | CDD:197566 | |||
LDLa | 256..289 | CDD:238060 | |||
LDLa | 295..329 | CDD:238060 | |||
LDLa | 333..369 | CDD:294076 | |||
FXa_inhibition | 390..424 | CDD:291342 | 17/36 (47%) | ||
EGF_CA | 426..456 | CDD:214542 | 0/29 (0%) | ||
LY | 495..530 | CDD:214531 | 11/38 (29%) | ||
LY | 540..581 | CDD:214531 | 13/40 (33%) | ||
Ldl_recept_b | 602..642 | CDD:278487 | 21/40 (53%) | ||
LY | 626..668 | CDD:214531 | 16/41 (39%) | ||
Ldl_recept_b | 689..728 | CDD:278487 | 7/38 (18%) | ||
FXa_inhibition | 747..784 | CDD:291342 | 13/36 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349227 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |