Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001382489.1 | Gene: | Lrp10 / 305880 | RGDID: | 1310471 | Length: | 712 | Species: | Rattus norvegicus |
Alignment Length: | 479 | Identity: | 117/479 - (24%) |
---|---|---|---|
Similarity: | 172/479 - (35%) | Gaps: | 131/479 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1265 PKVLRNHTCMH-SRTKCSHICIASGEGIARTRDVCSCPKHLMLLEDKENCGAFPA-------CGP 1321
Fly 1322 DHFTCAAPVSGI---SDVNKDCIPASWRCDGQKDCPDKSDEVGCPTCRADQFSCQSG------EC 1377
Fly 1378 IDKSLVCDGTTNCANGHDEADC--CKRPGEFQCPINKLCISAALLCDGWENCADGADE-SSDICL 1439
Fly 1440 QRRMAPATDKRAFMILIGATMITIFSIVYLLQFCRTRIGKSRTEPKDDQATDPLS---------- 1494
Fly 1495 -PSTLSKSQRVSKIASVADAVR-----MSTLNSRNSMNSYDRNHITGASSS----TTNGSS---- 1545
Fly 1546 --------MVAYPINPPPSPATRSRRPYRHYKIINQPPPPTPCSTDICDESDSNYTSKSNSNNSN 1602
Fly 1603 GGATKHSSSSAAACLQYGYDSEPYP---PPPTPRSHYHSDVRIVPESSCPPSP-------SSRSS 1657
Fly 1658 TYFSP-----LPP--PPSPVQSPS 1674 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | |
NHL | 168..503 | CDD:302697 | |||
NHL repeat | 172..237 | CDD:271320 | |||
LY | 252..293 | CDD:214531 | |||
NHL repeat | 261..298 | CDD:271320 | |||
NHL repeat | 303..339 | CDD:271320 | |||
NHL repeat | 341..419 | CDD:271320 | |||
NHL repeat | 428..476 | CDD:271320 | |||
LY | 472..511 | CDD:214531 | |||
NHL repeat | 477..503 | CDD:271320 | |||
Ldl_recept_b | 534..573 | CDD:278487 | |||
LY | 558..599 | CDD:214531 | |||
LY | 600..641 | CDD:214531 | |||
FXa_inhibition | 668..703 | CDD:291342 | |||
LY | 739..773 | CDD:214531 | |||
LY | 776..818 | CDD:214531 | |||
LY | 819..860 | CDD:214531 | |||
FXa_inhibition | 973..1010 | CDD:291342 | |||
LY | 1122..1164 | CDD:214531 | |||
FXa_inhibition | 1273..1313 | CDD:291342 | 6/40 (15%) | ||
LDLa | 1319..1362 | CDD:238060 | 15/45 (33%) | ||
LDLa | 1365..1399 | CDD:238060 | 10/39 (26%) | ||
LDLa | 1399..1433 | CDD:197566 | 14/35 (40%) | ||
Lrp10 | NP_001382489.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349222 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |