Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038960355.1 | Gene: | Lrp2 / 29216 | RGDID: | 68407 | Length: | 4665 | Species: | Rattus norvegicus |
Alignment Length: | 1490 | Identity: | 443/1490 - (29%) |
---|---|---|---|
Similarity: | 694/1490 - (46%) | Gaps: | 208/1490 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 LLFTTRHDIQVANITRPTGGPQIDVIVRDLAEAMAIDFYYAKNLVCWTDSGREIIECAQTNSSAL 153
Fly 154 QPLLRAPKQTVISTGLDK----------PEGLAMDWYTDKIYWTDGEKNRIEVATLDGRYQKVLF 208
Fly 209 WTDLDQPRAVAVVP--ARKLLIWTDWGEYPKIERASMDGDPLSRMTLVKEHVFWPNGLAVDLKNE 271
Fly 272 LIYWTDGKHHFIDVMRLDGSSRRTIVNN---LKYPFSLTFYDDRLYWTD-----------WQRGS 322
Fly 323 LNALDLQTRELKELIDTPKAPNSVRAWDPSLQPYEDNPCAHNNGNCSHLCLLATNS-QGFSCACP 386
Fly 387 TGVKLI--SANTCANGSQEMMFIVQRTQISKISLD----SPDYTIFPLPLGKVKYAIAIDYDPVE 445
Fly 446 EHIYWSDVETYTIKRAHADGTGVTDFV-TSEVRHPDGLALDWLARNLYWTDTVTDRIEVCRLDGT 509
Fly 510 AR--KVLIYEH-----LEEPRAIAVAPSLGWMFWSDWNERK---PKVERASLDGSERVVLVSENL 564
Fly 565 GWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISDNLKHLFGLSILDDYLYWTDWQRRS 629
Fly 630 IDRAHKITGNNRIVVVDQYPDLMGLKVTRLREVR-GQNACAVRNGGCSHLCLNRPRD-YVCRCAI 692
Fly 693 DYELANDKRTCVVPAAFLLFSRQEHIGRISIEYNEGNHNDERIPFK-DVRDAHALDVSVAERRIY 756
Fly 757 WTD-----QKSKCIFRAFLNGSYVQRIVDSGLIGPDGI---AVDWLANNIYWSDAEARR--IEVA 811
Fly 812 RLDGSSRRVLLWKGVEEPRSLVLEPRRGYMYWTE-SPTDSIRRAAMDGSDLQTIVA-GANHAAGL 874
Fly 875 TFDQETRRLYWATQSRPAKIESADWDGKKRQIL-VGSDMDEPYAVSLYQDYVYWSDWNTGDIERV 938
Fly 939 HKTTGQNRS--LVHSGMTYITSLLVFNDKRQ------TGVNPCKVNNGGCSHLCLAQPGRRGMTC 995
Fly 996 ACPTHYQLAKDGVSCIPPR-NYIIFSQRNCFGRLL--PNTTDCPNIPLPVSGKNIRAVDYDPITH 1057
Fly 1058 HIYW------IEGRSHSIKRSLANGTKVSLLANSGQPFDLAIDIIGRLLFWTCSQSNSINVTSFL 1116
Fly 1117 GESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSHQAIIRARVDGNERVELA-YKLEGVTALALD 1180
Fly 1181 QQSDMIYYAHG--KRIDAIDINGKNKKTLVSMHISQVINIAALGGFVYWLDDKTGVERI----TV 1239
Fly 1240 NGERRSAELQRLP-QITDIRAVWTPDPKVLRNHTCMHSRTKCSHICIASGEGIARTRDVCSCP-- 1301
Fly 1302 ---------KHLML------------------------LEDKENCG----------AFPACGPDH 1323
Fly 1324 FTCAAPVSGISDVNKDCIPASWRCDGQKDCPDKSDEVGC--PTCRA-DQFSCQSGECIDKSLVCD 1385
Fly 1386 GTTNCANG--HDEADC----CKRPGEF-QCPINKLCISAALLCDGWENCADGADESSDIC 1438 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 15/48 (31%) |
NHL | 168..503 | CDD:302697 | 125/368 (34%) | ||
NHL repeat | 172..237 | CDD:271320 | 23/66 (35%) | ||
LY | 252..293 | CDD:214531 | 15/40 (38%) | ||
NHL repeat | 261..298 | CDD:271320 | 14/36 (39%) | ||
NHL repeat | 303..339 | CDD:271320 | 10/46 (22%) | ||
NHL repeat | 341..419 | CDD:271320 | 33/80 (41%) | ||
NHL repeat | 428..476 | CDD:271320 | 13/48 (27%) | ||
LY | 472..511 | CDD:214531 | 16/39 (41%) | ||
NHL repeat | 477..503 | CDD:271320 | 11/25 (44%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 10/41 (24%) | ||
LY | 558..599 | CDD:214531 | 13/40 (33%) | ||
LY | 600..641 | CDD:214531 | 14/40 (35%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 11/35 (31%) | ||
LY | 739..773 | CDD:214531 | 12/38 (32%) | ||
LY | 776..818 | CDD:214531 | 17/46 (37%) | ||
LY | 819..860 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 15/36 (42%) | ||
LY | 1122..1164 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 11/74 (15%) | ||
LDLa | 1319..1362 | CDD:238060 | 16/42 (38%) | ||
LDLa | 1365..1399 | CDD:238060 | 14/36 (39%) | ||
LDLa | 1399..1433 | CDD:197566 | 14/38 (37%) | ||
Lrp2 | XP_038960355.1 | LDLa | 28..62 | CDD:238060 | |
LDLa | 67..103 | CDD:238060 | |||
LDLa | 108..142 | CDD:238060 | |||
LDLa | 148..179 | CDD:238060 | |||
LDLa | 183..217 | CDD:238060 | |||
LDLa | 222..256 | CDD:238060 | |||
LDLa | 265..299 | CDD:238060 | |||
LY | 460..500 | CDD:214531 | |||
LY | 502..547 | CDD:214531 | |||
LY | 550..590 | CDD:214531 | |||
LY | 775..817 | CDD:214531 | |||
Ldl_recept_b | 837..877 | CDD:423042 | |||
LY | 863..903 | CDD:214531 | |||
LDLa | 1025..1059 | CDD:238060 | |||
Ldl_recept_a | 1065..1101 | CDD:395011 | |||
LDLa | 1110..1144 | CDD:238060 | |||
LDLa | 1150..1184 | CDD:238060 | |||
LDLa | 1188..1223 | CDD:238060 | |||
LDLa | 1231..1263 | CDD:197566 | |||
LDLa | 1272..1306 | CDD:238060 | |||
LDLa | 1313..1345 | CDD:197566 | |||
FXa_inhibition | 1359..1394 | CDD:405372 | |||
EGF_CA | 1396..1435 | CDD:214542 | |||
LY | 1507..1549 | CDD:214531 | 13/41 (32%) | ||
LY | 1551..1595 | CDD:214531 | 19/45 (42%) | ||
LY | 1597..1638 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 1715..1746 | CDD:405372 | 16/31 (52%) | ||
Ldl_recept_b | 1889..1933 | CDD:395012 | 11/43 (26%) | ||
LY | 1917..1959 | CDD:214531 | 13/42 (31%) | ||
FXa_inhibition | 2028..2064 | CDD:405372 | 11/35 (31%) | ||
YncE | 2115..>2307 | CDD:225926 | 60/193 (31%) | ||
LY | 2188..2231 | CDD:214531 | 13/42 (31%) | ||
LY | 2233..2273 | CDD:214531 | 12/40 (30%) | ||
FXa_inhibition | 2352..2388 | CDD:405372 | 15/36 (42%) | ||
LY | 2465..2506 | CDD:214531 | 11/40 (28%) | ||
Ldl_recept_b | 2525..2565 | CDD:395012 | 14/39 (36%) | ||
LY | 2551..2591 | CDD:214531 | 10/39 (26%) | ||
LY | <2600..2631 | CDD:214531 | 7/33 (21%) | ||
FXa_inhibition | 2661..2698 | CDD:405372 | 11/41 (27%) | ||
LDLa | 2705..2737 | CDD:197566 | 2/31 (6%) | ||
LDLa | 2747..2781 | CDD:238060 | 16/42 (38%) | ||
exchanger_TraA | <2748..3136 | CDD:411343 | 48/129 (37%) | ||
LDLa | 2912..2944 | CDD:197566 | |||
LDLa | 3000..3034 | CDD:238060 | |||
LDLa | 3039..3070 | CDD:197566 | |||
LDLa | 3082..3116 | CDD:238060 | |||
cEGF | 3139..3162 | CDD:403760 | |||
EGF_CA | 3159..3198 | CDD:214542 | |||
LY | 3226..3268 | CDD:214531 | |||
LY | 3269..3311 | CDD:214531 | |||
Ldl_recept_b | 3340..3380 | CDD:395012 | |||
LY | 3365..3406 | CDD:214531 | |||
LY | 3407..3448 | CDD:214531 | |||
FXa_inhibition | 3476..>3505 | CDD:405372 | |||
LDLa | 3519..3553 | CDD:238060 | |||
LDLa | 3560..3591 | CDD:197566 | |||
LDLa | 3600..3632 | CDD:197566 | |||
LDLa | 3641..3673 | CDD:197566 | |||
LDLa | 3689..3721 | CDD:238060 | |||
LDLa | 3728..3761 | CDD:238060 | |||
LDLa | 3766..3800 | CDD:238060 | |||
LDLa | 3805..3839 | CDD:238060 | |||
LDLa | 3849..3881 | CDD:238060 | |||
LDLa | 3892..3922 | CDD:197566 | |||
LDLa | 3935..3969 | CDD:238060 | |||
EGF_CA | 4014..4054 | CDD:214542 | |||
LY | 4148..4183 | CDD:214531 | |||
Ldl_recept_b | 4204..4244 | CDD:395012 | |||
LY | 4229..4271 | CDD:214531 | |||
FXa_inhibition | 4345..>4363 | CDD:405372 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349217 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |