Protein Alignment arr and egg-1

DIOPT Version :9

• Sequence 1: NP_524737.2
• Gene: arr / 44279
• FlyBaseID: FBgn0000119
• Length: 1678
• Species: Drosophila melanogaster
• Sequence 2: NP_498237.2
• Gene: egg-1 / 175804
• WormBaseID: WBGene00015083
• Length: 551
• Species: Caenorhabditis elegans
• Alignment Length: 272
• Identity: 81/272 - (29%)
• Similarity: 115/272 - (42%)
• Gaps: 51/272 - (18%)

  Fly  1208 VSMHISQVINIAALGGFVYWLDDKTGVERITVNGERRSAELQRL-PQITDIRAVWTPDPKVLRN- 1270
            ||:.:..|:.:...||.:.:|     |..:|.:.::.||:...: ||.......|.|..|:..:
 Worm    47 VSITVCLVLLVLIFGGAIVYL-----VMSLTSSAQKMSADSMDISPQAIRHPKFWPPTDKIRFDD 106

  Fly  1271 --------------HTCMHSRTKCS---HICIASGEGIARTRDVCSCPKHLMLLEDKENCGAFPA 1318
                          .||......|:   |:.|.|.:.....||   |...    .|:|||....:
 Worm   107 LNGIPMTSLFPQNVSTCSGFGFACTGAVHMVIPSSKRCDGRRD---CEDG----SDEENCKECQS 164

  Fly  1319 CGPDHFTC------AAPVSGISDVNKD--CIPASWRCDGQKDCPDKSDEVGC-PTCRADQFSCQ- 1373
            .    |:|      .:...|.|.|...  |:.|...||..::|||.|||..| .:|..|||.|.
 Worm   165 V----FSCKLRPEEESKKKGRSTVQPTLICLTAQHLCDNVENCPDGSDEAVCKSSCSKDQFKCPG 225

  Fly  1374 SGECIDKSLVCDGTTNCANGHDEADCCK-RPGEFQCPINKLCISAALLCDGWENCADGADESSDI 1437
            |..|:..|..|||..:||:..||.:|.| :....:|  .|.||.|:.:|||...||||:||....
 Worm   226 SNACLPLSAKCDGINDCADASDEKNCSKCQNNAHKC--GKQCIKASHVCDGVAQCADGSDEQQCD 288

  Fly  1438 CLQRRMAPATDK 1449
            | ||  ...|||
 Worm   289 C-QR--CSGTDK 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
arr	NP_524737.2	LY	162..201	CDD:214531
		NHL	168..503	CDD:302697
		NHL repeat	172..237	CDD:271320
		LY	252..293	CDD:214531
		NHL repeat	261..298	CDD:271320
		NHL repeat	303..339	CDD:271320
		NHL repeat	341..419	CDD:271320
		NHL repeat	428..476	CDD:271320
		LY	472..511	CDD:214531
		NHL repeat	477..503	CDD:271320
		Ldl_recept_b	534..573	CDD:278487
		LY	558..599	CDD:214531
		LY	600..641	CDD:214531
		FXa_inhibition	668..703	CDD:291342
		LY	739..773	CDD:214531
		LY	776..818	CDD:214531
		LY	819..860	CDD:214531
		FXa_inhibition	973..1010	CDD:291342
		LY	1122..1164	CDD:214531
		FXa_inhibition	1273..1313	CDD:291342	10/42 (24%)
		LDLa	1319..1362	CDD:238060	15/50 (30%)
		LDLa	1365..1399	CDD:238060	15/34 (44%)
		LDLa	1399..1433	CDD:197566	14/34 (41%)
egg-1	NP_498237.2	LDLa	123..159	CDD:238060	10/42 (24%)
		LDLa	216..251	CDD:238060	15/34 (44%)
		LDLa	254..287	CDD:238060	14/34 (41%)
		LDLa	300..327	CDD:238060
		LDLa	<391..413	CDD:238060
		LDLa	425..455	CDD:238060
		LDLa	458..493	CDD:238060

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1215
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900