DRSC/TRiP Functional Genomics Resources

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Protein Alignment arr and F14B4.1

DIOPT Version :10

Sequence 1:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster
Sequence 2:NP_492474.2 Gene:F14B4.1 / 172750 WormBaseID:WBGene00008779 Length:722 Species:Caenorhabditis elegans


Alignment Length:420 Identity:139/420 - (33%)
Similarity:196/420 - (46%) Gaps:60/420 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 QRGSLNALDLQTRELKELIDTPKAPNSVRAWDPSLQPYED------------------------- 358
            :|.|.:..:|.|..:|   ..|||           ||.|:                         
 Worm   224 KRNSESRCELNTNAIK---SRPKA-----------QPLEECDTQGNCKCRLPGYYYEAARKKCLD 274

  Fly   359 -NPCAHNNGNCSHLCLLATNSQG-FSCAC-PTGVKLISAN-TCANGSQEMM--FIVQRTQISKIS 417
             :.|...:..||..|:   |..| |.|.| |...||.:.| ||....|..|  |......:..||
 Worm   275 VDECESLSSACSQKCV---NLPGTFECTCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNIS 336

  Fly   418 LDSPDYTIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGVTDFVTSEVRHPDGL 482
            .|...   |.|....::....||.|..|..:|::|:....|:|.:.:||........:|...:|:
 Worm   337 TDGKS---FQLQRAGLQKTAMIDIDVKENRLYYADIGANVIERMNIEGTFPQAVQRFDVDGLEGI 398

  Fly   483 ALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVE 547
            |:||:.||||  ....:.|.|..|||..|:.|....:..||:|.:.|:.|.||.:||: ....:.
 Worm   399 AVDWIGRNLY--SLRREDILVQSLDGRFRQPLYKNVMTLPRSITLHPAKGIMFVTDWS-ANAFIA 460

  Fly   548 RASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISD--NLKHL 610
            .||:|||....:::|.:.|||.:|:||.|:.|||.|...|.||.|||||:||||:|:|  ::.|:
 Worm   461 AASMDGSHFRKIITERITWPNAVAVDIFAEKIYWADAFLDTIESANMDGTGRRVIIADAGSVPHV 525

  Fly   611 FGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDL-MGLKVTRLREVRGQNACAVRNGG 674
            |||:|.|||||||||..|.|.||:|..|.| |.|:.|...| ..|||.. :.::.:........|
 Worm   526 FGLAIADDYLYWTDWTYRGILRANKHNGEN-ITVLAQTALLPYSLKVFH-KSLQPEETSTCETRG 588

  Fly   675 CSHLC-LNRPRDYVCRCAIDYELANDKRTC 703
            |..|| |.......|.|...::|.||.:.|
 Worm   589 CDQLCLLGENGAATCACGEGFDLLNDGKKC 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697 54/214 (25%)
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320 5/19 (26%)
NHL repeat 341..419 CDD:271320 25/108 (23%)
NHL repeat 428..476 CDD:271320 11/47 (23%)
LY 472..511 CDD:214531 14/38 (37%)
NHL repeat 477..503 CDD:271320 9/25 (36%)
Ldl_recept_b 534..574 CDD:459654 14/39 (36%)
LY 558..599 CDD:214531 20/40 (50%)
LY 600..641 CDD:214531 24/42 (57%)
FXa_inhibition 668..703 CDD:464251 10/35 (29%)
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
F14B4.1NP_492474.2 vWFA <272..313 CDD:469594 13/43 (30%)
LY 343..383 CDD:214531 10/39 (26%)
LY 391..425 CDD:214531 14/35 (40%)
Ldl_recept_b 448..487 CDD:459654 14/39 (36%)
LY 470..512 CDD:214531 20/41 (49%)
LY 513..549 CDD:214531 21/35 (60%)
FXa_inhibition 588..618 CDD:464251 10/29 (34%)
LDLa 622..658 CDD:238060
LDLa 663..698 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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