Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379135.1 | Gene: | lrp-1 / 172520 | WormBaseID: | WBGene00003071 | Length: | 4753 | Species: | Caenorhabditis elegans |
Alignment Length: | 1557 | Identity: | 418/1557 - (26%) |
---|---|---|---|
Similarity: | 679/1557 - (43%) | Gaps: | 341/1557 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 AMAIDFYYAKNLVCWTDSGREIIECAQTNSSALQPLLRAPKQTV-ISTGLDKPEGLAMDWYTDKI 184
Fly 185 YWTDGEKNRIEVATL-DGRYQKVLFWTDLDQPRAVAVVPARKLLIWTDWGEYPKIERASMDGDPL 248
Fly 249 SRMTLVKEHVFWPNGLAVDLKNELIYWTDGKHHFIDVMRLDGSSRRTIVNNLKY---PFSLTFYD 310
Fly 311 DRLYWTDWQRGSLNALDLQTRELKELIDTPKAPN---------------SVRAWDPSLQP-YEDN 359
Fly 360 PCAHNNGNCSHLCLLATNSQGFSCACPTGVKL-ISANTCANGSQEMMFIVQRTQISKISLDSPDY 423
Fly 424 TIFP-----LPLGKVKYAIAIDYDPVEEHIYWSDVETY-----------TIKRAHADGTGVTDFV 472
Fly 473 TSEVRHPDG---LALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPR------AIAVA 528
Fly 529 PSLGWMFWSD--WNERKPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEV 591
Fly 592 ANMDGSGRRVVISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYP------- 649
Fly 650 ---DLMGLKVTRLREVRGQNACAVRNGGCSHLCLNRPRDY---VCRCAIDYELANDKRTC-VVPA 707
Fly 708 AFLLFSRQ------------------EHIGRISIEYNEGNHNDERIPFKDVRDAHALDVSVAERR 754
Fly 755 IYWTDQKSKCIFRAFLNGSYVQRIVDSGLIGP---DGIAVDWLANNIYW--SDAEARRIEVARLD 814
Fly 815 GSSRRVLLWKGVEEPRSLVLEPRRGYMYWT---ESPTDSIRRAAMDGSDLQTIV-AGANHAAGLT 875
Fly 876 FDQETRRLYWATQSRPAKIESADWDGKKR-------QILVGSDMDEPYAVSLYQDYVYWSDWNTG 933
Fly 934 DIERVHKTTGQ--NRSLVHSGMTYITSL------LVFNDKRQ-TGVNPCKVNN----GGCSHLCL 985
Fly 986 AQPGRRGMTCACPTHYQLAKDGVSCIPPRNYIIFSQRNCFGRLLPNTTDCPNI--------PLP- 1041
Fly 1042 VSGKNIRAVDYD------------PITHHIYWIEGRSHSIKRSLANGTKVSLL-ANSGQPF---- 1089
Fly 1090 ----DLAIDIIGRLLFWTCSQSNSINVTSFLGESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVG- 1149
Fly 1150 -SHQAIIRARVD------GNERVELAYKLEGVTALALDQQSDMIYYAHGKR--IDAIDINGKNKK 1205
Fly 1206 TLVSMHISQVINI--------AALGGFVYWLDDK--TGVERITVNGERRSAELQRLPQITDIRAV 1260
Fly 1261 WTPDPKVLRNHTCMHSRTK--------CSHIC--IASGEGIARTRDVCSCPKHLMLLED------ 1309
Fly 1310 -------------KE-------------------NCGAFPAC------GPDHF-TCAAPVSGISD 1335
Fly 1336 VNKDCIPASWRCDGQKDCPDKSDEVGCPT---CRADQFSCQSGECIDKSLVCDGTTNCANGHDE- 1396
Fly 1397 ------ADCCKRPG--------EFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMA 1444 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 20/40 (50%) |
NHL | 168..503 | CDD:302697 | 125/374 (33%) | ||
NHL repeat | 172..237 | CDD:271320 | 27/65 (42%) | ||
LY | 252..293 | CDD:214531 | 16/40 (40%) | ||
NHL repeat | 261..298 | CDD:271320 | 14/36 (39%) | ||
NHL repeat | 303..339 | CDD:271320 | 8/35 (23%) | ||
NHL repeat | 341..419 | CDD:271320 | 34/94 (36%) | ||
NHL repeat | 428..476 | CDD:271320 | 11/58 (19%) | ||
LY | 472..511 | CDD:214531 | 15/41 (37%) | ||
NHL repeat | 477..503 | CDD:271320 | 10/28 (36%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 16/40 (40%) | ||
LY | 558..599 | CDD:214531 | 11/40 (28%) | ||
LY | 600..641 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 11/37 (30%) | ||
LY | 739..773 | CDD:214531 | 3/33 (9%) | ||
LY | 776..818 | CDD:214531 | 18/46 (39%) | ||
LY | 819..860 | CDD:214531 | 15/43 (35%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 11/40 (28%) | ||
LY | 1122..1164 | CDD:214531 | 12/49 (24%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 12/87 (14%) | ||
LDLa | 1319..1362 | CDD:238060 | 14/49 (29%) | ||
LDLa | 1365..1399 | CDD:238060 | 15/40 (38%) | ||
LDLa | 1399..1433 | CDD:197566 | 15/41 (37%) | ||
lrp-1 | NP_001379135.1 | LDLa | 53..87 | CDD:238060 | |
LDLa | 92..131 | CDD:238060 | |||
LDLa | 140..173 | CDD:238060 | |||
LDLa | 182..216 | CDD:238060 | |||
LDLa | 223..257 | CDD:238060 | |||
LDLa | 262..297 | CDD:238060 | |||
LY | 463..505 | CDD:214531 | |||
LY | 507..546 | CDD:214531 | |||
LY | 547..589 | CDD:214531 | |||
LY | 883..925 | CDD:214531 | |||
exchanger_TraA | <1054..1451 | CDD:411343 | |||
LDLa | 1057..1087 | CDD:197566 | |||
LDLa | 1146..1177 | CDD:197566 | |||
LDLa | 1187..1219 | CDD:238060 | |||
LDLa | 1228..1263 | CDD:238060 | |||
LDLa | 1270..1302 | CDD:238060 | |||
LDLa | 1313..1344 | CDD:238060 | |||
FXa_inhibition | 1447..1475 | CDD:405372 | |||
LY | 1511..1545 | CDD:214531 | 7/39 (18%) | ||
LY | 1548..1585 | CDD:214531 | 18/36 (50%) | ||
LY | 1590..1634 | CDD:214531 | 21/45 (47%) | ||
LY | 1635..1677 | CDD:214531 | 16/41 (39%) | ||
Ldl_recept_b | 1943..1986 | CDD:423042 | 17/42 (40%) | ||
LY | 1971..2012 | CDD:214531 | 11/40 (28%) | ||
LY | 2015..2052 | CDD:214531 | 13/37 (35%) | ||
LY | 2193..2239 | CDD:214531 | 18/45 (40%) | ||
LY | 2240..2283 | CDD:214531 | 16/44 (36%) | ||
LY | 2284..2325 | CDD:214531 | 11/49 (22%) | ||
LY | 2570..2612 | CDD:214531 | 10/43 (23%) | ||
LY | 2613..2655 | CDD:214531 | 11/41 (27%) | ||
LDLa | 2794..2824 | CDD:197566 | 3/29 (10%) | ||
LDLa | 2834..2868 | CDD:238060 | 11/33 (33%) | ||
LDLa | 2874..2907 | CDD:197566 | 14/35 (40%) | ||
LDLa | 2961..2994 | CDD:238060 | 1/2 (50%) | ||
LDLa | 3012..3038 | CDD:238060 | |||
LDLa | 3048..3088 | CDD:197566 | |||
LDLa | 3099..3131 | CDD:197566 | |||
LDLa | 3140..3174 | CDD:238060 | |||
LDLa | 3186..3218 | CDD:197566 | |||
FXa_inhibition | 3276..3305 | CDD:405372 | |||
LY | 3382..3424 | CDD:214531 | |||
Ldl_recept_b | 3445..3490 | CDD:395012 | |||
LY | 3476..3516 | CDD:214531 | |||
FXa_inhibition | 3586..3623 | CDD:405372 | |||
LDLa | 3627..3660 | CDD:197566 | |||
LDLa | 3671..3705 | CDD:238060 | |||
LDLa | 3792..3825 | CDD:197566 | |||
LDLa | 3837..3868 | CDD:238060 | |||
LDLa | 3878..3912 | CDD:238060 | |||
LDLa | 3917..3951 | CDD:238060 | |||
LDLa | 3958..3990 | CDD:197566 | |||
LDLa | 4049..4083 | CDD:238060 | |||
FXa_inhibition | 4097..>4121 | CDD:405372 | |||
EGF_CA | 4132..4163 | CDD:214542 | |||
NHL | 4219..>4431 | CDD:302697 | |||
NHL repeat | 4219..4257 | CDD:271320 | |||
NHL repeat | 4267..4330 | CDD:271320 | |||
NHL repeat | 4333..4371 | CDD:271320 | |||
NHL repeat | 4373..4410 | CDD:271320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I7853 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.710 |