Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491270.2 | Gene: | lrp-2 / 171981 | WormBaseID: | WBGene00003072 | Length: | 4858 | Species: | Caenorhabditis elegans |
Alignment Length: | 2586 | Identity: | 466/2586 - (18%) |
---|---|---|---|
Similarity: | 748/2586 - (28%) | Gaps: | 1210/2586 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 167 TGLDKPEGLAMDWYTDKIYWTDGEKNRIEVATLDG-RYQKVLFWTDLDQPRAVAVVPARKLLIWT 230
Fly 231 DWGE-------YP-KIERASMDGDPLSRMTLVKEHVFWPNGLAVDLKNELIYWTDGKHHFIDVMR 287
Fly 288 LDGSSRRTIV---NNLKYPFSLTFYDDRLYWTDWQRGSLNALDLQTRELKELIDTPKAPNSVRAW 349
Fly 350 DPSL---------QPYEDNPCAHNNGNCSHLCLLATNSQG------FSCACPTGVKL-------- 391
Fly 392 ----ISANTCAN---------------------------GSQE---------------------- 403
Fly 404 ---MMFI---------------------------------------------------------- 407
Fly 408 --------------------VQRTQI--------------------------------------- 413
Fly 414 ----------------------------------------------------------------- 413
Fly 414 -----------------------------------------SKISLD-------SPDY------- 423
Fly 424 ---------------------------------------TIFPLPLGKV---------------- 433
Fly 434 --------------------------------------------------------------KY- 435
Fly 436 -----------AIAIDYDPVEEH------IYWSDVETYTIKRAHADGTGVTD---------FVTS 474
Fly 475 EVRHPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDW 539
Fly 540 NERKPKVERASLDGSERVVL--VSE--NLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRR 600
Fly 601 VVISD--NLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLKVTRLREVR 663
Fly 664 GQ--NACAVRNG-GCSHLCLNRPRD-YVCRCAIDYELANDKRTCV-------------------- 704
Fly 705 --VPAAFLLFSRQE----------------------HIGRI------------------------ 721
Fly 722 ------------------SIEYNEGNHNDERI--------PFKDVRDAHALDVSV---------- 750
Fly 751 -----------------------------AER---RIYWT--------DQKSKCI---------- 765
Fly 766 ------------------FRAFLNGSYVQRIVDSGLIGPDGI----------------------- 789
Fly 790 --------------------------------------------------------AVDWLAN-- 796
Fly 797 ----------------------------------------NIYWSDA------------EARRIE 809
Fly 810 VARLDG-------SSRRVLLWKG------------------VEE----PRSLVLEPRRGYMYWTE 845
Fly 846 SPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQSRPAKIESADWDGKKRQILVGS 910
Fly 911 DMDEPYA--VSLY--QDYVYWSDW--NTGDIER-----------------VHKTTGQNRSLVHSG 952
Fly 953 MTYITSLLVFNDKRQTGVNPCKVNNGGCSHLCLAQPGRRGMT----CACPTHYQLAKDGVSCIPP 1013
Fly 1014 RNYIIFSQRNC--FGRLLPNTTDCPNIPLPVSG---KNIRAVDYDPITHHIYWIEGRSHSIKRSL 1073
Fly 1074 ANGTKVSLLANS-GQPFDLAIDIIGRLLFWTCSQSNSI--------NVTSFLGESVGVIDTGDSE 1129
Fly 1130 KPRNIAVHAMKRLLFWTD---VGSHQAIIRARVDGNERVELAYK-LEGVTALALDQQSDMIYYAH 1190
Fly 1191 GK--RIDAIDINGKNKKTLV-------------SMHISQVINIAALGGFVYWL-DDKTGVERITV 1239
Fly 1240 NGERRSAELQRLPQITDI----------RAVWTPDPKVLRNHTCMHSRTKCSHICIASGEGIART 1294
Fly 1295 RDVCSCPKHLMLLEDKENC-GAFP----------------------------------------- 1317
Fly 1318 ---ACGPDHFTC----AAPVSGISDVNKD-----------------------CIPASWRCDGQKD 1352
Fly 1353 CPDKSDEVGCP--TCRA-DQF------SC-QSGECIDKSLVCDGTTNCANGHDEADC-------- 1399
Fly 1400 --------CKRPGEFQCPINKLCISAALLCDGWENCADGAD----------------ESSDICLQ 1440
Fly 1441 -------RRMAP-ATDKRAFMILIGATMITIFSIVYLLQFCRTRIGKS----------------- 1480
Fly 1481 -RTEPKDDQATDPLS-----------------PSTLSKSQRV---SKIASVADAVR--------- 1515
Fly 1516 -MSTLNSRNSMNSY--------DRNHITGASSSTTNGSS--MVAYPINPPPSPATRS-------- 1561
Fly 1562 --------------RRPYRHYKIINQPPPPTPCSTDI---CDESDSNYTSKSNSNNSNGGATKHS 1609
Fly 1610 SSSAAACLQYGYDSEPYP------PPPTPR---SHYHSDVRIV-PESSCPP 1650 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 13/33 (39%) |
NHL | 168..503 | CDD:302697 | 118/806 (15%) | ||
NHL repeat | 172..237 | CDD:271320 | 24/73 (33%) | ||
LY | 252..293 | CDD:214531 | 17/40 (43%) | ||
NHL repeat | 261..298 | CDD:271320 | 15/39 (38%) | ||
NHL repeat | 303..339 | CDD:271320 | 6/35 (17%) | ||
NHL repeat | 341..419 | CDD:271320 | 24/379 (6%) | ||
NHL repeat | 428..476 | CDD:271320 | 18/152 (12%) | ||
LY | 472..511 | CDD:214531 | 16/38 (42%) | ||
NHL repeat | 477..503 | CDD:271320 | 10/25 (40%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 22/42 (52%) | ||
LY | 558..599 | CDD:214531 | 20/44 (45%) | ||
LY | 600..641 | CDD:214531 | 12/42 (29%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 9/36 (25%) | ||
LY | 739..773 | CDD:214531 | 11/111 (10%) | ||
LY | 776..818 | CDD:214531 | 15/181 (8%) | ||
LY | 819..860 | CDD:214531 | 11/62 (18%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 15/40 (38%) | ||
LY | 1122..1164 | CDD:214531 | 15/44 (34%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 10/39 (26%) | ||
LDLa | 1319..1362 | CDD:238060 | 17/69 (25%) | ||
LDLa | 1365..1399 | CDD:238060 | 15/41 (37%) | ||
LDLa | 1399..1433 | CDD:197566 | 13/65 (20%) | ||
lrp-2 | NP_491270.2 | LDLa | 80..119 | CDD:197566 | |
LDLa | 130..162 | CDD:197566 | |||
LY | 668..702 | CDD:214531 | 13/33 (39%) | ||
LY | 707..758 | CDD:214531 | 17/52 (33%) | ||
LY | 759..801 | CDD:214531 | 17/41 (41%) | ||
LDLa | 968..1000 | CDD:197566 | 3/31 (10%) | ||
LDLa | 1013..1047 | CDD:238060 | 0/33 (0%) | ||
LDLa | 1053..1087 | CDD:238060 | 1/33 (3%) | ||
LDLa | 1098..1129 | CDD:238060 | 0/30 (0%) | ||
LDLa | 1144..1175 | CDD:238060 | 0/30 (0%) | ||
LDLa | 1182..1216 | CDD:238060 | 0/33 (0%) | ||
FXa_inhibition | 1276..1305 | CDD:291342 | 4/28 (14%) | ||
LY | 1421..1463 | CDD:214531 | 16/41 (39%) | ||
LY | 1465..1508 | CDD:214531 | 17/42 (40%) | ||
LY | 1521..1555 | CDD:214531 | 19/33 (58%) | ||
LY | 2480..2521 | CDD:214531 | 9/40 (23%) | ||
LDLa | 2681..2715 | CDD:238060 | 6/33 (18%) | ||
LDLa | 2717..2751 | CDD:238060 | 11/33 (33%) | ||
LDLa | <2774..2798 | CDD:238060 | 11/23 (48%) | ||
LDLa | 2819..2851 | CDD:238060 | 11/31 (35%) | ||
LDLa | 2856..2891 | CDD:238060 | 8/55 (15%) | ||
LDLa | 2904..2938 | CDD:238060 | 4/33 (12%) | ||
LDLa | 2988..3020 | CDD:197566 | 6/31 (19%) | ||
LY | 3231..3270 | CDD:214531 | |||
Ldl_recept_b | 3296..3336 | CDD:278487 | |||
LY | 3319..3362 | CDD:214531 | |||
LY | 3363..3404 | CDD:214531 | |||
LDLa | 3481..3514 | CDD:197566 | |||
LDLa | 3574..3609 | CDD:238060 | |||
LDLa | 3614..3649 | CDD:197566 | |||
LDLa | 3659..3693 | CDD:238060 | |||
LDLa | 3881..3912 | CDD:238060 | |||
LY | 4084..4125 | CDD:214531 | |||
LY | 4139..4181 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |