DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment arr and LOC1269366

DIOPT Version :10

Sequence 1:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster
Sequence 2:XP_061500665.1 Gene:LOC1269366 / 1269366 VectorBaseID:AGAMI1_001044 Length:1154 Species:Anopheles gambiae


Alignment Length:745 Identity:199/745 - (26%)
Similarity:281/745 - (37%) Gaps:236/745 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 DPSLQPYEDNP--------CAHNNGNCSHLCLLATNSQGFSCACPTGVKLISANTCAN------- 399
            :|....::|.|        |...||.||.||:  ....||.|.|..|.||....||.:       
Mosquito   416 NPDCPEFQDEPADKCGKNECLQGNGGCSQLCV--DTPAGFYCDCKPGFKLADNRTCVDIDECEEP 478

  Fly   400 ------------------------------------GSQEMMFIVQRTQISKISLDSPDYTIFPL 428
                                                |...::| .:|..|.|||||..:.|..  
Mosquito   479 GSCSQSCINEIGTFKCECMDNYLRDPRDHTRCKPKEGHASLLF-ARRHDIRKISLDHREMTSI-- 540

  Fly   429 PLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHAD-GTGVTDFVTSEVRHPDGLALDWLARNLY 492
             :...|.|.|:|:......||||||....|.:|..| |:..|..|..::...||||:||:..::|
Mosquito   541 -VNDTKSATALDFVFRTGMIYWSDVSEKRIYKAPIDEGSDKTVVVKDQLVTSDGLAVDWIYNHIY 604

  Fly   493 WTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDGSERV 557
            :||.....||:...||...||||.:.||.|||||:.|..|||:|:||. ..|::|||.:||:.|.
Mosquito   605 FTDIKKSTIELTNFDGNMGKVLIQDDLEIPRAIALDPIDGWMYWTDWG-TNPRIERAGMDGTHRQ 668

  Fly   558 VLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVI--SDNLKHLFGLSILDDYL 620
            |:||..:.|||||.||:..|.:||.|.|.:.|...|.|||.|.|::  :|.|:|.|.::..:||:
Mosquito   669 VIVSYEVKWPNGITLDLVRKRVYWVDAKLNVISSCNYDGSKRSVILYSADYLRHPFSITTFEDYV 733

  Fly   621 YWTDWQRRSIDRAHKITGNNRIVVVD----QYPDLMGLKVTR-LREVRGQNACAVRNGGCSHLCL 680
            |||||.:.::.:|:|.||.:...|..    |:|  |.:.|.. .|:..|.|.|...||.||||||
Mosquito   734 YWTDWDKEAVFKANKFTGKDVEPVTAMHMLQHP--MTIHVYHPYRQPDGVNHCQAVNGHCSHLCL 796

  Fly   681 NRPR------DYVCRCAIDYELANDKRTCV---VPAAFLLFSRQEHIGRIS-------------I 723
            ..|:      ...|.|....:|.:|...||   .|.|..........|||.             |
Mosquito   797 PAPQINANSPKISCACPTGLKLMSDSLMCVEDEKPTAGPAGEDGTSSGRIDSNNGMNSSGANRHI 861

  Fly   724 EYNEGNHNDERIPFKDVRDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQRIVDS------- 781
            |::..|..|..   ||:         :|....:.....|....:...:.|.....|.|       
Mosquito   862 EHHSSNIYDSN---KDI---------IANISTFPNSNSSTTSSQPSSSSSSSSSSVPSVAPGAKN 914

  Fly   782 ------GLIG-------PDGIAVDWLANNIYWS-------------------------DAEARRI 808
                  ||.|       |.|.::   ||:::.:                         .|...|.
Mosquito   915 NWQSTIGLPGLSRPGHLPSGGSI---ANSLHLAAICTNLTRTVAIMESLKSSPGTVRDRAALHRS 976

  Fly   809 EVARLDGSSRRVLLWKGVEEPRSLVLEPRRGYMYWTE-------------SPTDSIRRAAMDGSD 860
            .:.|:||..:                .|.| |.||.:             :|.|:|.|       
Mosquito   977 YMNRVDGPGQ----------------HPAR-YSYWEQRKRFNLLENLFPRAPVDAIER------- 1017

  Fly   861 LQTIVAGANHAAGLTFDQETRRLYWATQSRPAKIESADWDGKKRQILVGSDMDEPYAVSLYQDYV 925
                   ||.||.    .:.|.||                            |...:.||  .||
Mosquito  1018 -------ANDAAA----TDHRTLY----------------------------DNELSASL--QYV 1041

  Fly   926 YWSDWNTGDIERVHKT--TGQNRSLVHSGM 953
            .|.      .|:...|  .|.:.:::|.|:
Mosquito  1042 RWI------CEKYRATMRNGTDGTIIHPGV 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697 55/204 (27%)
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320
NHL repeat 341..419 CDD:271320 26/119 (22%)
NHL repeat 428..476 CDD:271320 16/48 (33%)
LY 472..511 CDD:214531 14/38 (37%)
NHL repeat 477..503 CDD:271320 10/25 (40%)
Ldl_recept_b 534..574 CDD:459654 20/39 (51%)
LY 558..599 CDD:214531 20/40 (50%)
LY 600..641 CDD:214531 16/42 (38%)
FXa_inhibition 668..703 CDD:464251 14/40 (35%)
YncE <736..886 CDD:442618 35/207 (17%)
LY 776..818 CDD:214531 14/86 (16%)
LY 905..946 CDD:214531 9/42 (21%)
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
LOC1269366XP_061500665.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.