Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031762503.1 | Gene: | sorl1 / 100490681 | XenbaseID: | XB-GENE-995776 | Length: | 2199 | Species: | Xenopus tropicalis |
Alignment Length: | 1790 | Identity: | 361/1790 - (20%) |
---|---|---|---|
Similarity: | 567/1790 - (31%) | Gaps: | 656/1790 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 FGISNSWQY--KNVHMPSSSSLIASPPASAFV--NTPA--TLLFTTRHDI-----------QV-- 99
Fly 100 -----ANITR---------------------PTGGPQIDVIVRDLAEAMAIDFYYAKNLVCWTDS 138
Fly 139 GREIIECAQTNSSALQPLLRAPKQTVISTGLDKPEGLAMDWYTDKIYWTDGEKNRIEVAT----- 198
Fly 199 LDGRYQKVLFWTDLDQPRAVAVVP------ARKLLIWTDWGEYPKIERASMDGDPLSRMTLV--- 254
Fly 255 ------KEHVFWPNGLAVDLKNELIYWTDGKHHFIDVMRLDGSSRRTIVNNLKYPFS-----LTF 308
Fly 309 -YDDR-------------------LYWTDWQRG------SLNALDLQTRELKELIDTPKAPNSVR 347
Fly 348 AWDPSLQPYEDNPC------------AHN---NG----------NC------------------- 368
Fly 369 -SHLCL----LATNSQGFSCACPTGV--------KLISANTCANG-----------------SQE 403
Fly 404 MMFIVQRTQISKISLDSPDYTIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGV 468
Fly 469 TD-FVTSEVRHPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEH-LEEPRAIAVAPSL 531
Fly 532 GWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDG 596
Fly 597 SGRRVVISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLKVTRLRE 661
Fly 662 VRGQNACAVRNGGCSHLCLNRPRD-YVCRCAIDYE---LANDKRTCVVPAAFLLFS----RQEHI 718
Fly 719 GRISIEYNEGNHNDERIPFKDVRDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQRIVDSGL 783
Fly 784 IGPDGIAVDWLANNIYWSDAEARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPRRGYMYWTESPT 848
Fly 849 DSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQSRPAKIESADWDGKKRQILVGSDMD 913
Fly 914 EPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNRSLVHSGMTYITSLLVFNDKRQTGVNPCKVNNG 978
Fly 979 GCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPRNYIIFSQRNCFGRLLPNTTDCPNIPLPVS 1043
Fly 1044 GKNIRAVDYDPITHHIYWIEGRSHSIKRSLANGTKVSLLANSGQPFDLAIDIIGRLLFWTCSQSN 1108
Fly 1109 SINVTSFLGESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSHQAIIRARVDGNERVELAYKLEG 1173
Fly 1174 VTALALDQQSDMIYYAHGKRIDAIDINGKNKKTLVSMHISQVINIAALGGFVYWLDDKTGVERIT 1238
Fly 1239 VNGERRSAELQRLPQITDIRAVWTPDPKVLRNHTCMHSRTKCSHICIASGEGIARTRDVCSCPKH 1303
Fly 1304 LMLLEDKENCGAFPACGPDH-FTCAAPVSGISDVNKDCIPASWRCDGQKDCPDKSDEVGC----- 1362
Fly 1363 ------PTCRADQFSCQSGECIDKSLVCDGTTNCANGHDEADC-----------------CKRPG 1404
Fly 1405 EFQCPINKLCISAALLCDGWENCADGADE------SSDICLQRRMAPATDKRAFMILIGATMITI 1463
Fly 1464 FSIVYLLQFCRTRIGKSRTEPKDDQATDPLSPSTLSKSQRVSKIASVADAVRMSTL--------- 1519
Fly 1520 NSRNSMNSYDRNHITGASS----STTNGSSMVAYPINPPPSPATRS------RRPYRHYKII--- 1571
Fly 1572 ---NQPPPPTPCSTDICDESDSN----YTSKSNSN 1599 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 11/43 (26%) |
NHL | 168..503 | CDD:302697 | 92/460 (20%) | ||
NHL repeat | 172..237 | CDD:271320 | 13/75 (17%) | ||
LY | 252..293 | CDD:214531 | 9/49 (18%) | ||
NHL repeat | 261..298 | CDD:271320 | 8/36 (22%) | ||
NHL repeat | 303..339 | CDD:271320 | 8/66 (12%) | ||
NHL repeat | 341..419 | CDD:271320 | 25/151 (17%) | ||
NHL repeat | 428..476 | CDD:271320 | 16/48 (33%) | ||
LY | 472..511 | CDD:214531 | 14/38 (37%) | ||
NHL repeat | 477..503 | CDD:271320 | 9/25 (36%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 16/38 (42%) | ||
LY | 558..599 | CDD:214531 | 15/40 (38%) | ||
LY | 600..641 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 10/38 (26%) | ||
LY | 739..773 | CDD:214531 | 7/33 (21%) | ||
LY | 776..818 | CDD:214531 | 7/41 (17%) | ||
LY | 819..860 | CDD:214531 | 0/40 (0%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 7/36 (19%) | ||
LY | 1122..1164 | CDD:214531 | 5/41 (12%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 6/39 (15%) | ||
LDLa | 1319..1362 | CDD:238060 | 16/43 (37%) | ||
LDLa | 1365..1399 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1399..1433 | CDD:197566 | 14/50 (28%) | ||
sorl1 | XP_031762503.1 | VPS10 | 115..744 | CDD:214740 | 94/512 (18%) |
LY | 777..812 | CDD:214531 | 12/34 (35%) | ||
LY | 815..854 | CDD:214531 | 12/38 (32%) | ||
Ldl_recept_b | 879..920 | CDD:395012 | 17/40 (43%) | ||
LY | 904..944 | CDD:214531 | 15/42 (36%) | ||
LY | 944..982 | CDD:214531 | 15/37 (41%) | ||
LDLa | 1069..1103 | CDD:238060 | 7/34 (21%) | ||
LDLa | 1114..1144 | CDD:238060 | 7/36 (19%) | ||
Ldl_recept_a | 1148..1183 | CDD:395011 | 11/169 (7%) | ||
LDLa | 1189..1221 | CDD:197566 | 12/68 (18%) | ||
LDLa | 1231..1262 | CDD:238060 | 13/107 (12%) | ||
LDLa | 1272..1299 | CDD:197566 | 7/44 (16%) | ||
LDLa | 1316..1350 | CDD:238060 | 6/38 (16%) | ||
LDLa | 1363..1394 | CDD:238060 | 15/39 (38%) | ||
LDLa | 1408..1442 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1460..1495 | CDD:238060 | 15/35 (43%) | ||
LDLa | 1509..1537 | CDD:238060 | 5/43 (12%) | ||
FN3 | 1546..1617 | CDD:214495 | 15/72 (21%) | ||
FN3 | 1639..1730 | CDD:238020 | 7/30 (23%) | ||
FN3 | 1922..2003 | CDD:214495 | |||
FN3 | 2013..2100 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |