Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009301583.1 | Gene: | lrp3 / 100170796 | ZFINID: | ZDB-GENE-080116-3 | Length: | 824 | Species: | Danio rerio |
Alignment Length: | 851 | Identity: | 193/851 - (22%) |
---|---|---|---|
Similarity: | 270/851 - (31%) | Gaps: | 273/851 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 983 LCLAQPG--------RRGMTCA--CPTHYQLAKDGVSCI----PPRNYIIFSQRNCFGRLLPNTT 1033
Fly 1034 DCPN-------------------IPLPVSGKNIRAVDYDPITHHIYWIEGRSHSIKRSLANGTKV 1079
Fly 1080 SLLANSGQPFDLAIDIIGRLLFWTCSQSNSI--NVTSFLGESV-------GVIDTGDSEKPRN-I 1134
Fly 1135 AVHAMKR-------LLFWTDVGSHQAI--------IRARVDGNERVELAYKLEGVTALALDQQSD 1184
Fly 1185 MIYYAHGKRI-------DAIDINGKNKKTLVSMHISQVINIAALGGFVYWLDDKTGV-ERITVN- 1240
Fly 1241 --GERRSAELQRLPQITDIRAVWTPDPK---VLRNHTCMHSRTKCSHICIASGEGIARTRDVCSC 1300
Fly 1301 PKHLMLLEDKENCGAFPA---CGPDHFTCAAPVSGISDVNKDCIPASWRCDGQKDCPDKSDEVGC 1362
Fly 1363 PTCRADQFSCQ--SGECIDKSLVCDGTTNCANGHDEADC--CKRPGEFQCPINKLCISAALLCDG 1423
Fly 1424 WENCADGADESSDICLQRRMAPATDKRAFMILIGATMITIFSIVYL-----LQFCRTR------I 1477
Fly 1478 GKSRTEPKDDQATDPLSPSTLSKSQRVSKIAS--VADAVRMSTL-NSRNSMNSYDRNHITGASSS 1539
Fly 1540 TT-----------NGSSMVA-YPINPPPSPATRSRRPYRHYKIIN--------------QPPP-- 1576
Fly 1577 ------------------------------PTP-----CSTDICDESDSNYTSKSNSNNSNGGAT 1606
Fly 1607 KHSSSSAAACLQYGYDSEPYPP--PPTPRSHYHSDVRIVPESSCP---PSPSSRSSTYFSPLPPP 1666
Fly 1667 PSPVQS 1672 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | |
NHL | 168..503 | CDD:302697 | |||
NHL repeat | 172..237 | CDD:271320 | |||
LY | 252..293 | CDD:214531 | |||
NHL repeat | 261..298 | CDD:271320 | |||
NHL repeat | 303..339 | CDD:271320 | |||
NHL repeat | 341..419 | CDD:271320 | |||
NHL repeat | 428..476 | CDD:271320 | |||
LY | 472..511 | CDD:214531 | |||
NHL repeat | 477..503 | CDD:271320 | |||
Ldl_recept_b | 534..573 | CDD:278487 | |||
LY | 558..599 | CDD:214531 | |||
LY | 600..641 | CDD:214531 | |||
FXa_inhibition | 668..703 | CDD:291342 | |||
LY | 739..773 | CDD:214531 | |||
LY | 776..818 | CDD:214531 | |||
LY | 819..860 | CDD:214531 | |||
FXa_inhibition | 973..1010 | CDD:291342 | 10/36 (28%) | ||
LY | 1122..1164 | CDD:214531 | 13/57 (23%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 7/39 (18%) | ||
LDLa | 1319..1362 | CDD:238060 | 12/42 (29%) | ||
LDLa | 1365..1399 | CDD:238060 | 11/35 (31%) | ||
LDLa | 1399..1433 | CDD:197566 | 17/35 (49%) | ||
lrp3 | XP_009301583.1 | CUB | 31..141 | CDD:238001 | 24/125 (19%) |
LDLa | 151..185 | CDD:238060 | 8/38 (21%) | ||
LDLa | 197..234 | CDD:238060 | 8/47 (17%) | ||
CUB | 239..350 | CDD:238001 | 24/127 (19%) | ||
LDLa | 354..389 | CDD:238060 | 15/51 (29%) | ||
LDLa | 392..428 | CDD:238060 | 11/35 (31%) | ||
LDLa | 431..465 | CDD:238060 | 18/37 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590472 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.830 |