DRSC/TRiP Functional Genomics Resources

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Protein Alignment arr and lrp4

DIOPT Version :9

Sequence 1:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster
Sequence 2:XP_031756584.1 Gene:lrp4 / 100101694 XenbaseID:XB-GENE-494512 Length:1998 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320
NHL repeat 341..419 CDD:271320
NHL repeat 428..476 CDD:271320
LY 472..511 CDD:214531
NHL repeat 477..503 CDD:271320
Ldl_recept_b 534..573 CDD:278487
LY 558..599 CDD:214531
LY 600..641 CDD:214531
FXa_inhibition 668..703 CDD:291342
LY 739..773 CDD:214531
LY 776..818 CDD:214531
LY 819..860 CDD:214531
FXa_inhibition 973..1010 CDD:291342
LY 1122..1164 CDD:214531
FXa_inhibition 1273..1313 CDD:291342
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
lrp4XP_031756584.1 LDLa 127..166 CDD:238060
Ldl_recept_a 170..205 CDD:395011
LDLa 210..242 CDD:238060
LDLa 248..282 CDD:238060
Ldl_recept_a 330..365 CDD:395011
LDLa 370..404 CDD:238060
LDLa 412..449 CDD:238060
FXa_inhibition 458..493 CDD:405372
EGF_CA 495..534 CDD:214542
LY 560..602 CDD:214531
LY 605..645 CDD:214531
LY 646..689 CDD:214531
LY 690..732 CDD:214531
LY 733..773 CDD:214531
FXa_inhibition 802..>829 CDD:405372
LY 866..906 CDD:214531
LY 908..948 CDD:214531
Ldl_recept_b 971..1011 CDD:395012
LY 996..1037 CDD:214531
LY 1039..1072 CDD:214531
FXa_inhibition 1106..1143 CDD:405372
NHL <1185..1377 CDD:302697
LY 1218..1258 CDD:214531
Ldl_recept_b 1279..1319 CDD:395012
FXa_inhibition 1413..1448 CDD:405372
LY 1484..1518 CDD:214531
LY 1520..1562 CDD:214531
Ldl_recept_b 1583..1623 CDD:395012
LY 1607..1649 CDD:214531
FXa_inhibition 1717..>1741 CDD:405372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 107 1.000 Domainoid score I6441
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D121310at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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