DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment arr and sspo

DIOPT Version :9

Sequence 1:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster
Sequence 2:XP_021325919.1 Gene:sspo / 100036547 ZFINID:ZDB-GENE-051114-1 Length:5530 Species:Danio rerio


Alignment Length:1852 Identity:352/1852 - (19%)
Similarity:521/1852 - (28%) Gaps:779/1852 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VTTKATKCTKSNSGV----GWRQ---MLIGFLLI-----------CFGISNSWQYKNVHMPSSSS 72
            :|...|..|.:::|.    |.|.   ::.|.||:           .||....|     |:.....
Zfish   615 ITALHTTLTVTDAGSVLVNGHRNPLPVVTGDLLVRRASSSVLLIQAFGAQLMW-----HLDGPLL 674

  Fly    73 LIASPPASAF-VNTPATLLFTTRHDIQVANITRPTGGPQIDVIVRDLAEAMAIDFYYAKNLVCWT 136
            .|...|..|. |......|..::||    :.|.|.|.      |.:.|.:.|..|....   |..
Zfish   675 FITLQPGFAHKVRGLCGTLSWSQHD----DFTTPEGD------VENSAASFAAKFIVGS---CPA 726

  Fly   137 DSG------------REIIE--CAQTNSSALQ---------PLLRAPKQTVISTGLD-------- 170
            .|.            |::.|  |:..:|:..|         |.:|.....|.|.|..        
Zfish   727 PSAMTSDPCGTLTQRRQLAERVCSVIHSNVFQACHDVVDREPFMRLCVSEVCSCGPQASCHCSVL 791

  Fly   171 -------KPEGLAMDWYT----------DKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQPRAV 218
                   ..||..:.|..          .::|...|.......|.|                   
Zfish   792 TAYATHCAQEGALLSWRNHTFCPVQCSGGQVYQECGRLCGTSCADL------------------- 837

  Fly   219 AVVPARKLLIWTDWGEYPKIERASMDGDPLSRMTLVKEHVFWPNGLAVDLKNELIYWTDGKHHFI 283
                      |..|         |.:.|..||:.:  .....|:|||.|.:.:.:     ..|..
Zfish   838 ----------WDGW---------SCEPDEGSRVCV--SGCQCPDGLAQDAQGQCV-----PVHMC 876

  Fly   284 -----DVMRLDGSSRRTIVNNLKYPFSLTFYDDRLYWTDWQRGSLNALDLQTRELKE----LIDT 339
                 |.:...|||   |.||......             .||..|..||...||.:    ||.:
Zfish   877 PCKSGDTLHPAGSS---INNNCNTCVC-------------ARGVWNCTDLSCPELNQCPGSLIFS 925

  Fly   340 PK-------APNS------------------VRAWDPSLQPYEDNPCAHN------NGNCSHLCL 373
            |:       :|||                  |...|..::| ::.||.||      |...|..| 
Zfish   926 PRSCLRTCSSPNSPLDACTEPIHGCICPEGTVLLGDQCVKP-DECPCHHNGRLYFTNDTISKDC- 988

  Fly   374 LATNSQGFSCAC-----PTGVKLISANTCANGSQEMMFIVQRTQISKISLDSPDYTIFPLPLGKV 433
                   .:|.|     ..|..|.|....|.|....           |:.|...|:.    ||..
Zfish   989 -------NTCVCREQRWHCGQALCSGTCVATGDPHY-----------ITFDGRHYSF----LGDC 1031

  Fly   434 KYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGVTDFVTSEVRHPDGLALDWLARNLYWTDTVT 498
            :|.:      |:|.   |.:.:.:.:......||||                       .|.:||
Zfish  1032 EYVL------VQES---SGLFSVSAENVPCGSTGVT-----------------------CTKSVT 1064

  Fly   499 DRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDGS----ERV-- 557
                 ..:..||      .||...:|:.|             ...|.....|..||    |||  
Zfish  1065 -----LTIGNTA------IHLLRGKAVTV-------------NGIPVTLPKSYSGSGLILERVGL 1105

  Fly   558 -VLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISDNLKHLFGLSILDDYLY 621
             |.:|..||           ..:.|             || |.||.:. .:.||.|         
Zfish  1106 FVSLSSRLG-----------VTLLW-------------DG-GMRVYVR-LMPHLHG--------- 1135

  Fly   622 WTDWQRRSIDRAHKITGN----------NRIVVVDQYPDLMGLKVTRLREVRGQNACAVRNGGCS 676
                      |...:.||          .|..:::..|:|.|            |:..: :..|.
Zfish  1136 ----------RVGGLCGNFDGDAENDFTTRQGIMESTPELFG------------NSWKI-SPSCP 1177

  Fly   677 HLCLNRPRDYVCRCAID-YELANDKRTCVVPAAFLLFSRQEHIGRISIEYNEGNHNDERIPFKDV 740
            .:.....||   .|.|: :.:...|:.|.|               |:.|.....|::  :|::..
Zfish  1178 DVADQDLRD---PCFINPHRVTWAKKKCAV---------------INQEIFSSCHSE--VPYQQY 1222

  Fly   741 RDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQRIVDSGLIGPDGIAVDWLANNIYWSDAEA 805
            .|              |      |:|.|.  |      .|||                  .|.|.
Zfish  1223 YD--------------W------CVFDAC--G------CDSG------------------GDCEC 1241

  Fly   806 RRIEVAR-LDGSSRR--VLLWKGVEEPRSLVLEPRRGYMY------------WTESPTDSIRRAA 855
            ....||. .:..:||  .:.|:..|   ...|:...|.:|            .|.|.:||:..|.
Zfish  1242 LCTAVAAYAEECNRRGVYVRWRSQE---LCPLQCENGLVYEACGAACSPACPSTPSLSDSLCSAL 1303

  Fly   856 MDGSDLQTIVAGANHAAGLTFDQETRRLYWATQSRPAKIESADWDGKKRQILVGSDMDEPYAVSL 920
                   :.|.|.....|..:..:      |..| |::. ..:|||..          .|....:
Zfish  1304 -------SCVEGCFCPQGTVYHDD------ACIS-PSQC-PCEWDGSV----------FPAGAMV 1343

  Fly   921 YQDYVYWSDWNTGDIERV-HKTTGQNR---SLVHSGMTYITSLLVFNDKRQTGV----------- 970
            .|....||.::...|..: |.|...:.   :|:|.|:.     :........|:           
Zfish  1344 TQHCQNWSVYSLFIILNITHCTRFSSEVFTALLHYGLN-----VSIRSSCSAGLWQCVGSPCPPP 1403

  Fly   971 NPCKVNNGGCS------------------------HLCLAQPGRRGMTCACPTHYQLAKDGVSCI 1011
            :|||.:...||                        .:|       .:||. |.|::.:  |.:|:
Zfish  1404 SPCKDSEFRCSGGSERCIPAVWVCDNEDDCGDGSDEVC-------PITCP-PEHFRCS--GGACL 1458

  Fly  1012 PPRNYIIFSQRNCFGRLLPNTTD------CPNIPLPVSG--------KNIRAVDYDPITHHIYWI 1062
            |       .:..|.|.  |:..|      ||. ..|.||        .|.|.|.           
Zfish  1459 P-------VELRCDGH--PDCADQSDEDFCPP-STPESGCPSGEFRCANGRCVP----------- 1502

  Fly  1063 EGRSHSIKRSLANGTKVSLLANSGQPFDLAIDIIGRLLFWTCSQSNSINVTSFLGESVGVIDTGD 1127
               .|.:    .:|......|:....:|..  ::.|...:.||....:   .||....|..|.||
Zfish  1503 ---GHKV----CDGRMDCGFADDSDEYDCG--VVCRQEEFRCSSGRCV---LFLHRCDGHDDCGD 1555

  Fly  1128 SEKPRNIAVHAMKRLLFWTDVGSHQAIIRARV-DGNERVELAYKLEGVTALALDQQSDMIYYAHG 1191
            ....|. .|.|:..|    .....|.:...|| |||.                            
Zfish  1556 YSDERG-CVCALGEL----QCPGDQCVSAERVCDGNR---------------------------- 1587

  Fly  1192 KRIDAIDINGKNKKTLVSMHISQVINIAALGGFVYWLDDKTGVERITVNGERRSAELQRLPQITD 1256
                                                 |..:|::.:                   
Zfish  1588 -------------------------------------DCPSGIDEL------------------- 1596

  Fly  1257 IRAVWTPDPKVLRNHTCMHSRTKCSHICIASGEGIARTRDVCSCPKHLMLLEDKENCGAFPACGP 1321
                                      ||.|.|                              |..
Zfish  1597 --------------------------ICPAKG------------------------------CSQ 1605

  Fly  1322 DHFTCAAPVSGISDVNKDCIPASWRCDGQKDCPDKSDEVGCP-TCRADQFSCQSG-ECIDKSLVC 1384
            ..|.|   .||      .|:|.:|||||:.||.|.|||..|. ||::|||.|||| :|:....:|
Zfish  1606 FEFGC---TSG------QCVPLAWRCDGETDCLDGSDEKRCSRTCQSDQFLCQSGDQCVQYQQLC 1661

  Fly  1385 DGTTNCANGHDEA-DCCKR------PGEFQCPINKLCISAALLCDGWENCADGADESSDIC--LQ 1440
            |||.||.:..||: |.|..      ||.|.|. |:.|::|:.:|:|..:|..|.||.  :|  ::
Zfish  1662 DGTPNCRDASDESLDNCGSTRIPPCPGSFSCD-NRTCVNASRVCNGIPDCPKGEDEI--LCDKVR 1723

  Fly  1441 RRMAPATDKRAFMILIGATMITIFSIVYLLQFCRTRIGKSRTEPKDDQATDPLSP----STLSKS 1501
            ...||.::.....|....|... .|.|.....|........||..|:.......|    |..|:|
Zfish  1724 PSAAPPSEGNISRICPEFTCAD-GSCVPFNTMCNGVSDCPGTEASDESGCGVWGPWGPWSACSRS 1787

  Fly  1502 --------QRVSKIASVADA-----VRMSTLNSRNSMNSYDRNHITGASSSTTNGSSMVAYPINP 1553
                    || |....::|.     .|....::..:::.|.....|.::.|.:.|...:......
Zfish  1788 CGSGIMSRQR-SCSPGLSDCRGHKKQRQQCYSTACAVDGYWSPWSTWSNCSKSCGGVEIRQRECF 1851

  Fly  1554 PPSPATRSRRPYRHYKIINQPPPPTPCSTDI--CDESDSNYTSKSNSNNSNGGATKHSSSSAAAC 1616
            ||....||         ....|..|..:|||  |.:..|:.:..:       |...|   :.|:|
Zfish  1852 PPQNGGRS---------CADLPGETNMTTDIRPCAQDCSDVSCPA-------GLVSH---TCASC 1897

  Fly  1617 LQYGYDSEPYPPPPTPRSHYHSDVRIVPESSC 1648
                         |...:|........|:|.|
Zfish  1898 -------------PLTCAHVSGTATCDPDSKC 1916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
arrNP_524737.2 LY 162..201 CDD:214531 10/63 (16%)
NHL 168..503 CDD:302697 73/404 (18%)
NHL repeat 172..237 CDD:271320 9/74 (12%)
LY 252..293 CDD:214531 9/45 (20%)
NHL repeat 261..298 CDD:271320 11/41 (27%)
NHL repeat 303..339 CDD:271320 9/39 (23%)
NHL repeat 341..419 CDD:271320 21/113 (19%)
NHL repeat 428..476 CDD:271320 10/47 (21%)
LY 472..511 CDD:214531 4/38 (11%)
NHL repeat 477..503 CDD:271320 3/25 (12%)
Ldl_recept_b 534..573 CDD:278487 11/45 (24%)
LY 558..599 CDD:214531 7/40 (18%)
LY 600..641 CDD:214531 8/50 (16%)
FXa_inhibition 668..703 CDD:291342 6/35 (17%)
LY 739..773 CDD:214531 5/33 (15%)
LY 776..818 CDD:214531 7/42 (17%)
LY 819..860 CDD:214531 11/54 (20%)
FXa_inhibition 973..1010 CDD:291342 10/60 (17%)
LY 1122..1164 CDD:214531 13/42 (31%)
FXa_inhibition 1273..1313 CDD:291342 4/39 (10%)
LDLa 1319..1362 CDD:238060 18/42 (43%)
LDLa 1365..1399 CDD:238060 17/35 (49%)
LDLa 1399..1433 CDD:197566 12/39 (31%)
sspoXP_021325919.1 VWD 190..342 CDD:214566
C8 392..458 CDD:312319
TIL 462..517 CDD:307783
VWD 557..706 CDD:321964 22/99 (22%)
C8 745..814 CDD:214843 12/68 (18%)
TIL 817..876 CDD:307783 16/103 (16%)
VWD 1009..1157 CDD:306577 48/263 (18%)
C8 1196..1269 CDD:214843 24/138 (17%)
TIL 1272..1328 CDD:307783 13/69 (19%)
LDLa 1409..1439 CDD:197566 2/29 (7%)
LDLa 1445..1479 CDD:238060 10/45 (22%)
LDLa 1488..1524 CDD:238060 6/53 (11%)
LDLa 1528..1562 CDD:238060 10/37 (27%)
LDLa 1564..1598 CDD:238060 10/147 (7%)
LDLa 1603..1637 CDD:238060 18/42 (43%)
LDLa 1640..1673 CDD:197566 16/32 (50%)
LDLa 1687..1719 CDD:238060 13/34 (38%)
TSP1 1775..1821 CDD:214559 9/46 (20%)
TSP1 1827..1886 CDD:214559 14/67 (21%)
TIL 1885..1940 CDD:307783 9/55 (16%)
TSP1 1984..2037 CDD:214559
FA58C 2144..2309 CDD:238014
LDLa 2320..2357 CDD:238060
FA58C 2400..2551 CDD:330301
LDLa 2646..2680 CDD:238060
LDLa 2702..2736 CDD:238060
TSP1 2742..2791 CDD:214559
TSP1 2796..2847 CDD:214559
TIL 2875..2917 CDD:307783
TSP1 2960..3009 CDD:214559
TSP1 3019..3070 CDD:214559
TSP1 3232..3283 CDD:214559
TSP1 3288..3329 CDD:214559
TIL 3335..3387 CDD:307783
TSP1 3430..3482 CDD:214559
TSP1 3487..3538 CDD:214559
TIL 3548..3597 CDD:307783
TSP1 3643..>3685 CDD:214559
TSP1 3885..3936 CDD:214559
TSP1 3942..3986 CDD:214559
TSP1 4113..4165 CDD:214559
TSP1 4184..4232 CDD:214559
TSP1 4249..4301 CDD:214559
TSP1 4307..4358 CDD:214559
TIL 4363..4418 CDD:307783
TSP1 4557..4608 CDD:214559
TSP1 4614..4665 CDD:214559
TIL 4719..4774 CDD:307783
TSP1 4884..4933 CDD:214559
TIL 4948..4993 CDD:307783
TSP1 5037..5084 CDD:214559
TSP1 5090..5139 CDD:214559
TIL 5143..5197 CDD:307783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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