DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoxN and NHP10

DIOPT Version :10

Sequence 1:NP_001260269.1 Gene:SoxN / 44275 FlyBaseID:FBgn0029123 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_010282.3 Gene:NHP10 / 851562 SGDID:S000002160 Length:203 Species:Saccharomyces cerevisiae


Alignment Length:103 Identity:17/103 - (16%)
Similarity:44/103 - (42%) Gaps:35/103 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 NKNQQH------ADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 228
            :|.::|      .:..|||.||::::....:.::..:.    :.::::.|...||:|:|.:::|:
Yeast    79 SKTKRHKVKERDPNMPKRPTNAYLLYCEMNKERIRQNG----SLDVTRDLAEGWKNLNEQDRKPY 139

  Fly   229 IDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM 266
            .                         |..::.:|:|.|
Yeast   140 Y-------------------------KLYSEDRERYQM 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoxNNP_001260269.1 HMG-box_SoxB 177..252 CDD:438790 11/74 (15%)
NHP10NP_010282.3 NHP6B 24..203 CDD:227935 17/103 (17%)

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