Protein Alignment SoxN and HMGB3

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001031075.1
• Gene: HMGB3 / 838659
• AraportID: AT1G20696
• Length: 147
• Species: Arabidopsis thaliana
• Alignment Length: 94
• Identity: 27/94 - (28%)
• Similarity: 48/94 - (51%)
• Gaps: 4/94 - (4%)

  Fly   177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHN-SEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHM 240
            ::.|||.:||.|:....|.....::||..: :.:.|..|.:||.||:|||.|::.:|.:.:..:.
plant    33 NKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYE 97

  Fly   241 KEHPDYKYR---PRRKTKTLTKTKEKYPM 266
            |....|..:   ..||.:.||...::..|
plant    98 KNMKAYNKKLVIALRKMRNLTSQFQRLTM 126

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	22/71 (31%)
HMGB3	NP_001031075.1	HMGB-UBF_HMG-box	35..101	CDD:238686	21/65 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920