Protein Alignment SoxN and sox1

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001074465.1
• Gene: sox1 / 779569
• XenbaseID: XB-GENE-1018269
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 438
• Identity: 172/438 - (39%)
• Similarity: 202/438 - (46%)
• Gaps: 112/438 - (25%)

  Fly   130 SHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQR 194
            |....|.....|.|.....|.     |||...|..|.          ||||||||||||||||||
 Frog     3 SMMMETDLHSPGVQPPSNTGQ-----TGGGGGNKANQ----------DRVKRPMNAFMVWSRGQR 52

  Fly   195 RKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTK 259
            ||||.:|||||||||||||||:||.:||:||||||||||||||:|||||||||||||||||||.|
 Frog    53 RKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLK 117

  Fly   260 TKEKYPM-GGLMPGQTVGGGAPGEPVTPTRVQGQPG----QNQSLNGSGGSA------------- 306
             |:||.: |||:  ...|||..|..::|....|..|    |.....|||.||
 Frog   118 -KDKYSLAGGLL--HAAGGGHMGVGLSPGGGGGGTGGVVVQRLESPGSGASAGGYAHMNGWANGA 179

  Fly   307 ---AAAAAAAAAAAQQAR----QDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHY----- 359
               :.|||||||..|:|:    |...|.....|:.|:.:..|       .:...:...|:
 Frog   180 YPGSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHPHH-------PHHHPHHHPHHNPTPH 237

  Fly   360 -------AAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYG----GSSLQQQPGSP 413
                   ...||||..:      .|..:.|.||       ....|||.||    .||.||..|||
 Frog   238 PPPPPPQPMHRYDMSAL------QYSPLPGAQT-------YMTASPSGYGALGYSSSQQQHQGSP 289

  Fly   414 TPYGGGGGGGGQVSCQSHSPS----DSSIKSEP-VSPSPSAIALNNNNNINNNHIMKREYSS--- 470
            :............:..:.|.:    .|.:|||| |||..|....:|......:   .||..|
 Frog   290 SSAAVAAAAAAAAAAAASSGALGALGSLVKSEPSVSPPVSGGGPHNRPPCPGD---LREMISMYL 351

  Fly   471 ---------AAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQ 509
                     ||||||||||||||       ...::.||.      |||
 Frog   352 PSGGEAGDPAAAAAAAAAAAAAA-------TSRLHSLPQ------HYQ 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	63/70 (90%)
sox1	NP_001074465.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..38		12/49 (24%)
		SOX-TCF_HMG-box	36..107	CDD:238684	63/70 (90%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	197..249		6/58 (10%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	320..343		8/25 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.010