Protein Alignment SoxN and sox4

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001039084.1
• Gene: sox4 / 733893
• XenbaseID: XB-GENE-480727
• Length: 387
• Species: Xenopus tropicalis
• Alignment Length: 377
• Identity: 114/377 - (30%)
• Similarity: 159/377 - (42%)
• Gaps: 99/377 - (26%)

  Fly   141 GQQQHLGAGSAL----------SSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRR 195
            |:....|||..|          ::.|||.:::.:...|.      :..:|||||||||||:.:||
 Frog    18 GESSESGAGIELDMASSPTPGATASTGGKADDPSWCKTP------SGHIKRPMNAFMVWSQIERR 76

  Fly   196 KMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKT 260
            |:...:|.|||:|||||||.:||.|.:.:|.|||.||:|||..||.::||||||||:|.|:
 Frog    77 KIMEQSPDMHNAEISKRLGKRWKQLKDGDKIPFIREAERLRLKHMADYPDYKYRPRKKVKS---- 137

  Fly   261 KEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGS------------------AA 307
                           ||..||:     :..|.||.:.|..||.||                  ..
 Frog   138 ---------------GGSKPGD-----KACGSPGGSSSPTGSTGSGKPPVKKSSGTKLCNKPHTK 182

  Fly   308 AAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNN 372
            ....|.|...||.            .:|:.:.::.....|:..|          ::.....:|..
 Frog   183 LVLGARAFPEQQP------------CIPDHHSLYKSRTAASGRQ----------EKKPKHRVYIF 225

  Fly   373 GYAMYQ---TVSGGQTSPYGSSLQQPGSP-SPY--GGSSLQQQPGSPTPYGGGGGGGGQVSCQSH 431
            |.|.||   :|:...:....||..:...| |.|  |..|.|..||||:.:.|...........||
 Frog   226 GGAGYQGSPSVAVPASPTLSSSSAEASDPLSLYEDGSGSAQNSPGSPSEHDGYTRASSPAPSTSH 290

  Fly   432 SPSDSSIKSEPVSPSPSA-----------IALNNNNNINNNHIMKREYSSAA 472
            |.|.||..|.|.|.|.|:           :.||.:....|..:  ..:||||
 Frog   291 SSSSSSAASSPSSASSSSSSSDEELEDELLELNPSPGFENMSL--GSFSSAA 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	43/70 (61%)
sox4	NP_001039084.1	SOX-TCF_HMG-box	59..130	CDD:238684	43/70 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010