Protein Alignment SoxN and Sox12

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001162121.1
• Gene: Sox12 / 689988
• RGDID: 1586313
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 87/260 - (33%)
• Similarity: 125/260 - (48%)
• Gaps: 40/260 - (15%)

  Fly   179 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEH 243
            :|||||||||||:.:|||:....|.|||:|||||||.:|:.|.:|||.||:.||:|||..||.::
  Rat    40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADY 104

  Fly   244 PDYKYRPRRKTK-TLTKTKEKYPMGGLMPGQTVGGGA---PGEPVTPTRVQGQPGQNQSLNGSGG 304
            ||||||||:|:| ...|.:.:.|.||       |||:   || |..|    |:.|:    ..:||
  Rat   105 PDYKYRPRKKSKGAPAKARPRPPGGG-------GGGSRLKPG-PQLP----GRGGR----RATGG 153

  Fly   305 SAAAAAAAAAAAAQQARQDMYQMN------------APNGYMPNGYMMHA-----DPAGAAAYQT 352
            .....|||.....:...:::.::.            .|.|....|....|     :.|.|:|...
  Rat   154 PLGGGAAAPEDDDEDEEEELLEVRLLETPGRELWRMVPAGRAARGPAERAQGPSSEGAAASAASP 218

  Fly   353 SYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYG 417
            :........:..:.......|..  :||:.|: .|.|...:.|..|:....|:|.:.|....|.|
  Rat   219 TLSEDEEPEEEEEEAATAEEGEE--ETVASGE-EPLGFLSRMPPGPTGLDCSALDRDPDLLPPSG 280

  Fly   418  417
              Rat   281  280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	46/72 (64%)
Sox12	NP_001162121.1	HMG-box_SF	29..116	CDD:469606	48/75 (64%)