Protein Alignment SoxN and Sox12

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001162121.1
• Gene: Sox12 / 689988
• RGDID: 1586313
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 87/260 - (33%)
• Similarity: 125/260 - (48%)
• Gaps: 40/260 - (15%)

  Fly   179 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEH 243
            :|||||||||||:.:|||:....|.|||:|||||||.:|:.|.:|||.||:.||:|||..||.::
  Rat    40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADY 104

  Fly   244 PDYKYRPRRKTK-TLTKTKEKYPMGGLMPGQTVGGGA---PGEPVTPTRVQGQPGQNQSLNGSGG 304
            ||||||||:|:| ...|.:.:.|.||       |||:   || |..|    |:.|:    ..:||
  Rat   105 PDYKYRPRKKSKGAPAKARPRPPGGG-------GGGSRLKPG-PQLP----GRGGR----RATGG 153

  Fly   305 SAAAAAAAAAAAAQQARQDMYQMN------------APNGYMPNGYMMHA-----DPAGAAAYQT 352
            .....|||.....:...:::.::.            .|.|....|....|     :.|.|:|...
  Rat   154 PLGGGAAAPEDDDEDEEEELLEVRLLETPGRELWRMVPAGRAARGPAERAQGPSSEGAAASAASP 218

  Fly   353 SYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYG 417
            :........:..:.......|..  :||:.|: .|.|...:.|..|:....|:|.:.|....|.|
  Rat   219 TLSEDEEPEEEEEEAATAEEGEE--ETVASGE-EPLGFLSRMPPGPTGLDCSALDRDPDLLPPSG 280

  Fly   418  417
              Rat   281  280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	43/69 (62%)
Sox12	NP_001162121.1	SOX-TCF_HMG-box	39..110	CDD:238684	43/69 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.910