Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005625.2 | Gene: | SOX3 / 6658 | HGNCID: | 11199 | Length: | 446 | Species: | Homo sapiens |
Alignment Length: | 385 | Identity: | 147/385 - (38%) |
---|---|---|---|
Similarity: | 183/385 - (47%) | Gaps: | 94/385 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 147 GAGSALSSLTGGSSNNNNNS--ATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEI 209
Fly 210 SKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGLMPGQ 273
Fly 274 TVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQA------RQDMYQMNAPNG 332
Fly 333 YMPNGYMMHADPAGAAAYQTSYMG----------QHYAAQRYDMGHMYNNGYAMYQTVSGGQTSP 387
Fly 388 YGSSLQQPG------------SPSPYGGSSLQQQPGSPTPYG----GGGGGGGQVSCQSHSPSDS 436
Fly 437 SIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMY 496 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 62/70 (89%) |
SOX3 | NP_005625.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 29..48 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 87..140 | 9/34 (26%) | |||
SOX-TCF_HMG-box | 138..209 | CDD:238684 | 62/70 (89%) | ||
SOXp | 208..302 | CDD:289133 | 41/132 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X927 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |