Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571777.1 | Gene: | sox19b / 64812 | ZFINID: | ZDB-GENE-010111-1 | Length: | 293 | Species: | Danio rerio |
Alignment Length: | 401 | Identity: | 139/401 - (34%) |
---|---|---|---|
Similarity: | 170/401 - (42%) | Gaps: | 125/401 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 125 MTSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATA-NKNQQHADRVKRPMNAFMV 188
Fly 189 WSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRK 253
Fly 254 TKTLTKTKE---KYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAA 315
Fly 316 AAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTV 380
Fly 381 SGGQTSPYGSSLQQPGSPSPY--GGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPV 443
Fly 444 SPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHY 508
Fly 509 QTDSPDLQQQH 519 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 61/70 (87%) |
sox19b | NP_571777.1 | SOX-TCF_HMG-box | 52..123 | CDD:238684 | 61/70 (87%) |
SOXp | 122..203 | CDD:289133 | 35/154 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X927 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.910 |