Protein Alignment SoxN and hmgb2a

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001032501.1
• Gene: hmgb2a / 641484
• ZFINID: ZDB-GENE-051120-126
• Length: 213
• Species: Danio rerio
• Alignment Length: 117
• Identity: 34/117 - (29%)
• Similarity: 53/117 - (45%)
• Gaps: 19/117 - (16%)

  Fly   167 ATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDE 231
            |...|.::..:..|||.:||.|:....|.|:..|||.:...:|:|:||..|..||..||.|:..:
Zfish    83 AKGGKKKKDPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQK 147

  Fly   232 AKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEP 283
            |.:|:..:.|:...|:.:                  |:.|.....|| ||.|
Zfish   148 AMKLKEKYEKDVAAYRAK------------------GVKPDGAKKGG-PGRP 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	25/70 (36%)
hmgb2a	NP_001032501.1	HMG_box_2	6..77	CDD:286146
		HMG_box	95..162	CDD:278906	24/66 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920