Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571718.1 | Gene: | sox9a / 60641 | ZFINID: | ZDB-GENE-001103-1 | Length: | 462 | Species: | Danio rerio |
Alignment Length: | 527 | Identity: | 129/527 - (24%) |
---|---|---|---|
Similarity: | 199/527 - (37%) | Gaps: | 146/527 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 70 SQSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELSPTQSSIGSHHMTSPVSHQQH 134
Fly 135 TQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMAS 199
Fly 200 DNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKY 264
Fly 265 PMGGLM-----------------PGQTVG---------GGAPGEPVTPT--RVQGQPGQNQSLNG 301
Fly 302 SGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDM 366
Fly 367 GHMYN--------NGYAMYQTVSGGQTSPYGSS----LQQPGSPSPYGGSSLQQQPGSPTPYGGG 419
Fly 420 GGGGGQVSCQSHSPSDSSIKSEPVSP--------SPSAIALNNNNNINNNH-------IMKREYS 469
Fly 470 SAAAAAAAAAAAAAAGGGELNHLMNMY-HLPDEQRHLLHYQTDS---PDLQQQHQSMQQQQQHLP 530
Fly 531 QQHLSQQ 537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 43/70 (61%) |
sox9a | NP_571718.1 | Sox_N | 22..96 | CDD:289229 | 14/81 (17%) |
SOX-TCF_HMG-box | 106..176 | CDD:238684 | 43/72 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |