Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001025555.1 | Gene: | hmgxb4 / 594948 | XenbaseID: | XB-GENE-951781 | Length: | 554 | Species: | Xenopus tropicalis |
Alignment Length: | 377 | Identity: | 73/377 - (19%) |
---|---|---|---|
Similarity: | 127/377 - (33%) | Gaps: | 116/377 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 SDMKGSLLHATMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHH------HMS 64
Fly 65 AHIAASQSPNPLSSLQSS---MANTLNGSQVGQQQQQQQQQQSSPLHSSSELS-PTQSSIGSHHM 125
Fly 126 TSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGG--------------------SSNNNNNSATAN 170
Fly 171 KNQQHADRVK---------RP-------------------------------------------- 182
Fly 183 ----------MNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 237
Fly 238 VHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRV 289 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 21/133 (16%) |
hmgxb4 | NP_001025555.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 14..34 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 47..368 | 49/273 (18%) | |||
DUF4171 | 107..226 | CDD:316308 | 30/127 (24%) | ||
HMG-box | 364..423 | CDD:238037 | 18/60 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 418..468 | 9/51 (18%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1641977at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |