Protein Alignment SoxN and sox5

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_021330769.1
• Gene: sox5 / 567413
• ZFINID: ZDB-GENE-000607-13
• Length: 763
• Species: Danio rerio
• Alignment Length: 323
• Identity: 85/323 - (26%)
• Similarity: 134/323 - (41%)
• Gaps: 83/323 - (25%)

  Fly    32 SPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAHIAASQSPNPLSS--LQSSM--ANTLNGSQV 92
            ||.|...|.:.||...|.|             ||..:....|:.|||  |.||:  |..||..:.
Zfish   408 SPASPQVPALKLGPGSLKH-------------SAPSSIGGPPSRLSSIDLLSSITSAGYLNDHEA 459

  Fly    93 GQQQQQQQQQQSSPLHSSSE-LSPTQSSIGSHHMTSPVSHQ-------------QHTQQQQHGQQ 143
            ..:..|:.::....|....: |....:::.|..:.:..|.:             |..:|.:..:.
Zfish   460 VTKAFQEARKMKEQLKREEQVLDAKVAAVNSLSLNNGRSEKVRFMEKAALESLSQQLKQSEESKF 524

  Fly   144 QHLGAGSALSSLTGGSSNNNNN-----SATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPK 203
            .|......:|..:.||.:.:::     :.....::.|   :||||||||||::.:|||:....|.
Zfish   525 THAMMDFGISGDSDGSPSVSDSRIFREARGRGSSEPH---IKRPMNAFMVWAKDERRKILQAFPD 586

  Fly   204 MHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKE------ 262
            ||||.|||.||::||.::..||:|:.:|..||...|::::|||||:||.|...|...|:
Zfish   587 MHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEY 651

  Fly   263 ------------------------------KYP----MGGL----MPGQTVGGGAPGEPVTPT 287
                                          .||    |.|:    ||.:.....:..|||.||
Zfish   652 KAIMRNRRQEMRQYFTVGQQAQLPLSSAGVVYPGALSMAGMPSPQMPSEHSSMSSSPEPVPPT 714

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	36/70 (51%)
sox5	XP_021330769.1	SSL_OB	332..>415	CDD:332684	3/6 (50%)
		SOX-TCF_HMG-box	561..632	CDD:238684	37/73 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000