Protein Alignment SoxN and sox1b

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001032751.1
• Gene: sox1b / 562710
• ZFINID: ZDB-GENE-060322-5
• Length: 340
• Species: Danio rerio
• Alignment Length: 440
• Identity: 161/440 - (36%)
• Similarity: 194/440 - (44%)
• Gaps: 137/440 - (31%)

  Fly   157 GGSSNNNNNSATANKNQQ-HADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDL 220
            |..:|.|......|...: :.||||||||||||||||||||||.:|||||||||||||||:||.:
Zfish    14 GAQTNTNTGHTGPNSGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLM 78

  Fly   221 SESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGLMPGQTVGGGAP-GEP 283
            ||:||||||||||||||:|||||||||||||||||||.| |:||.: |||:.|...|||.. |
Zfish    79 SEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLK-KDKYSLAGGLLAGSGGGGGVGLG-- 140

  Fly   284 VTPTRVQGQPGQNQSLN---GSGGSAAA-----------------AAAAAAAAAQQARQDMYQMN 328
                  .|..|..|.|.   |.|||.||                 ||||||||..|..|..|
Zfish   141 ------MGAAGVGQRLESPVGHGGSTAASYAHMNGWTNGAYSGQVAAAAAAAAMMQEAQLAY--- 196

  Fly   329 APNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQ 393
               |..|          |:.|:.  :.|.|:........|.|......|..:|..|:  |.|:
Zfish   197 ---GQHP----------GSGAHH--HHGHHHHPHNPQPMHRYEMTALQYSPLSNSQS--YMSA-- 242

  Fly   394 QPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEP-VSPSPSAIALNNNNN 457
               |||.|||.|..|...|.....|..|..|           |.:|||| |||..:|
Zfish   243 ---SPSGYGGISYTQHQNSSVASSGAIGALG-----------SLVKSEPSVSPPVNA-------- 285

  Fly   458 INNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSM 522
                      :|.|..:            |:|..:::||               .|..:....|:
Zfish   286 ----------HSRAPCS------------GDLREMISMY---------------LPTAEAGDPSV 313

  Fly   523 QQQQQHLPQQHLSQQHQQIPQQHHTMQQQQQQHHLQHQQSLRAMAPLAHM 572
            |.:...:|                       ||:.....|:....||.|:
Zfish   314 QSRLHAVP-----------------------QHYQSSTTSVNGTVPLTHI 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	63/70 (90%)
sox1b	NP_001032751.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..35		4/20 (20%)
		SOX-TCF_HMG-box	36..107	CDD:238684	63/70 (90%)
		SOXp	106..>198	CDD:289133	43/106 (41%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..219		5/32 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170596258
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	5.840