Protein Alignment SoxN and sox1b

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001032751.1
• Gene: sox1b / 562710
• ZFINID: ZDB-GENE-060322-5
• Length: 340
• Species: Danio rerio
• Alignment Length: 440
• Identity: 161/440 - (36%)
• Similarity: 194/440 - (44%)
• Gaps: 137/440 - (31%)

  Fly   157 GGSSNNNNNSATANKNQQ-HADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDL 220
            |..:|.|......|...: :.||||||||||||||||||||||.:|||||||||||||||:||.:
Zfish    14 GAQTNTNTGHTGPNSGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLM 78

  Fly   221 SESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGLMPGQTVGGGAP-GEP 283
            ||:||||||||||||||:|||||||||||||||||||.| |:||.: |||:.|...|||.. |
Zfish    79 SEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLK-KDKYSLAGGLLAGSGGGGGVGLG-- 140

  Fly   284 VTPTRVQGQPGQNQSLN---GSGGSAAA-----------------AAAAAAAAAQQARQDMYQMN 328
                  .|..|..|.|.   |.|||.||                 ||||||||..|..|..|
Zfish   141 ------MGAAGVGQRLESPVGHGGSTAASYAHMNGWTNGAYSGQVAAAAAAAAMMQEAQLAY--- 196

  Fly   329 APNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQ 393
               |..|          |:.|:.  :.|.|:........|.|......|..:|..|:  |.|:
Zfish   197 ---GQHP----------GSGAHH--HHGHHHHPHNPQPMHRYEMTALQYSPLSNSQS--YMSA-- 242

  Fly   394 QPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEP-VSPSPSAIALNNNNN 457
               |||.|||.|..|...|.....|..|..|           |.:|||| |||..:|
Zfish   243 ---SPSGYGGISYTQHQNSSVASSGAIGALG-----------SLVKSEPSVSPPVNA-------- 285

  Fly   458 INNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSM 522
                      :|.|..:            |:|..:::||               .|..:....|:
Zfish   286 ----------HSRAPCS------------GDLREMISMY---------------LPTAEAGDPSV 313

  Fly   523 QQQQQHLPQQHLSQQHQQIPQQHHTMQQQQQQHHLQHQQSLRAMAPLAHM 572
            |.:...:|                       ||:.....|:....||.|:
Zfish   314 QSRLHAVP-----------------------QHYQSSTTSVNGTVPLTHI 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	67/74 (91%)
sox1b	NP_001032751.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..35		4/20 (20%)
		HMG-box_SoxB	35..114	CDD:438790	71/78 (91%)
		SOXp	106..>198	CDD:463537	43/106 (41%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..219		5/32 (16%)
		9aaTAD. /evidence=ECO:0000250|UniProtKB:P41225	297..305		2/22 (9%)