Protein Alignment SoxN and sox13

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001429657.1
• Gene: sox13 / 555983
• ZFINID: ZDB-GENE-100519-1
• Length: 628
• Species: Danio rerio
• Alignment Length: 296
• Identity: 78/296 - (26%)
• Similarity: 118/296 - (39%)
• Gaps: 92/296 - (31%)

  Fly    73 PNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLH-SSSELSPTQSSIGSHHMTSPVSHQQHTQ 136
            |||.|:.....:.|:           .:|..|.||: ::...:|:..::...|:.|...|:...|
Zfish   295 PNPHSTPIKRSSGTV-----------YRQDTSQPLNLTAKPKTPSPQALELAHLQSGYRHRDLPQ 348

  Fly   137 -------------------QQQHGQQQHL--GAGSALSSLTGGSSNNNNNSATANK--------- 171
                               |..|..||.|  |.||.      |...:||....|::
Zfish   349 SPPRSALSLSFLGEGDVVTQAIHDAQQLLRGGQGST------GRERDNNTRLEASRDRMDDGHSR 407

  Fly   172 -NQQH------------------------ADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISK 211
             |:.|                        :..:||||||||||::.:||::....|.||||.|||
Zfish   408 TNEDHHSSDSEGQMAISGVGSFGESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISK 472

  Fly   212 RLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKT--------------KTLTKTKE 262
            .||::||.:|..||:|:.:|..||...|::.:|||||:||.|.              |.:.|::.
Zfish   473 ILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRR 537

  Fly   263 KYPMGGLMPGQTVG--GGAPGE---PVTPTRVQGQP 293
            :.......|.|:..  ...|.|   |.||..:...|
Zfish   538 QEQRVSYPPSQSEQQLPYPPSEGQYPTTPVSMSTLP 573

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	38/74 (51%)
sox13	NP_001429657.1	None