Protein Alignment SoxN and hmgb3b

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001017769.1
• Gene: hmgb3b / 550466
• ZFINID: ZDB-GENE-050417-290
• Length: 198
• Species: Danio rerio
• Alignment Length: 84
• Identity: 24/84 - (28%)
• Similarity: 47/84 - (55%)
• Gaps: 0/84 - (0%)

  Fly   164 NNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 228
            |......|.::..:..:||.:.|.::...||..:.:.||.:...:::|:||..|.:||:|||:||
Zfish    79 NPGKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPF 143

  Fly   229 IDEAKRLRAVHMKEHPDYK 247
            :..|.:|:..:.|:...|:
Zfish   144 LSNADKLKDKYQKDMAFYR 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	22/70 (31%)
hmgb3b	NP_001017769.1	HMG_box_2	7..78	CDD:286146
		HMG_box	94..161	CDD:278906	21/66 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010