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Protein Alignment SoxN and RGD1559962
DIOPT Version :9
Sequence 1: | NP_001260269.1 |
Gene: | SoxN / 44275 |
FlyBaseID: | FBgn0029123 |
Length: | 761 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_008756867.1 |
Gene: | RGD1559962 / 498988 |
RGDID: | 1559962 |
Length: | 209 |
Species: | Rattus norvegicus |
Alignment Length: | 104 |
Identity: | 28/104 - (26%) |
Similarity: | 50/104 - (48%) |
Gaps: | 12/104 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 180 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHP 244
|||.:||.::....|.|:.|::|.:...:.:|:||..|.:.|..:|:|:..:|.:|:..:.|:..
Rat 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEEYEKDIA 160
Fly 245 DYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEP 283
.| :.|.|..:|...||:..|.....||
Rat 161 AY------------RAKGKSEVGKKGPGRPTGSKKKNEP 187
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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