Protein Alignment SoxN and sox3

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001007502.1
• Gene: sox3 / 493228
• XenbaseID: XB-GENE-484815
• Length: 307
• Species: Xenopus tropicalis
• Alignment Length: 379
• Identity: 140/379 - (36%)
• Similarity: 171/379 - (45%)
• Gaps: 114/379 - (30%)

  Fly   158 GSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSE 222
            |:.....|::..::     :|||||||||||||||||||||.:|||||||||||||||.||.||:
 Frog    24 GTPGGKGNASIPDQ-----ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSD 83

  Fly   223 SEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPT 287
            ||||||||||||||||||||:||||||||||||||.| |:||.    :||..:   |||  |:|
 Frog    84 SEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLK-KDKYS----LPGNLL---APG--VSP- 137

  Fly   288 RVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQT 352
                                  .|::....|  |.|.|.  ..||:....|.:..|..|.:.:..
 Frog   138 ----------------------VASSVGVGQ--RIDTYA--HMNGWTNGAYSLMQDQLGYSQHPG 176

  Fly   353 SYMGQHYAAQ-RYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQ--QPGSPSPYGGSSLQQQPGSPT 414
            ....|....| |||||              |.|.||..||.|  ...:.|.|..|....|..|..
 Frog   177 MNSPQMQQIQHRYDMG--------------GLQYSPMMSSAQTYMNAAASTYSMSPAYNQQSSTV 227

  Fly   415 PYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAA 479
            ...|..|              |.:||||.||.|:.          .:|..:
 Frog   228 MSLGSMG--------------SVVKSEPSSPPPAI----------TSHTQR-------------- 254

  Fly   480 AAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQH 533
                |..|:|..:::||..|.         .|:.|    ..|:|..:.|...||
 Frog   255 ----ACLGDLRDMISMYLPPG---------GDASD----PSSLQSSRLHSVHQH 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	64/70 (91%)
sox3	NP_001007502.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..41		3/21 (14%)
		SOX-TCF_HMG-box	39..110	CDD:238684	64/70 (91%)
		SOXp	109..189	CDD:372055	33/116 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.010