Protein Alignment SoxN and Sox100B

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Alignment Length: 606
• Identity: 158/606 - (26%)
• Similarity: 232/606 - (38%)
• Gaps: 189/606 - (31%)

  Fly   113 LSPTQSSIGSHHMTSPV----------SHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSA 167
            :|.:.||..|.....||          ..:|...|.|.|:::.....:|:..:..|...|...::
  Fly     1 MSDSSSSNCSKDRAKPVETLVLANYALKAEQKKAQGQGGRKEDERITTAVMKVLEGYDWNLVQAS 65

  Fly   168 TANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEA 232
            ......:..:.:||||||||||::..||.|:...|.:.|||:||.||..||:|.:|:|:||::.|
  Fly    66 AKAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFA 130

  Fly   233 KRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVG-GGAPGEPVTPTRVQGQPGQN 296
            ::||..|.:|||||||:||||     |.:       ::|.|..| ||:||..:|.:...|..|:.
  Fly   131 EKLRMTHKQEHPDYKYQPRRK-----KAR-------VLPSQQSGEGGSPGPEMTLSATMGSSGKP 183

  Fly   297 QSLNGSG------GSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYM 355
            :|.|.:|      |:|||...:.|:....|.   ...|:.:.:....:|...:.|.||    |.|
  Fly   184 RSSNSNGQRRAGKGNAAADLGSCASTISHAN---VGSNSSDVFSNEAFMKSLNSACAA----SLM 241

  Fly   356 GQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYG-GSSLQQQPGSPTPYGGG 419
            .|                                 ||.:.|..||.. .||:.......|||.
  Fly   242 EQ---------------------------------SLIETGLDSPCSTASSMSSLTPPATPYN-- 271

  Fly   420 GGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAA--------- 475
                                   |:||.:..:..||.:     ::.|:.|...|.|
  Fly   272 -----------------------VAPSNAKASAANNPS-----LLLRQLSEPVANAGDGYGVLLE 308

  Fly   476 ----------------AAAAAAAAAGGG---ELNHLMNM---------------YHLPDEQRHLL 506
                            :|...:.|.|||   |::.|.|:               |..|....
  Fly   309 AGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYPANGG--- 370

  Fly   507 HYQTDSPDLQQQHQSMQQQQ--QHLP----------QQHLSQQHQQIPQQHHTMQQQQQQHHLQH 559
            |:.|:.   |||.|::|..:  .:.|          .|:...|...:.|.||........|.|.|
  Fly   371 HFATEE---QQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHH 432

  Fly   560 QQSLRAMAPLAHMXEMASA------------YGAAGSSVSVSP---PLPPY-------MPT---- 598
            ...|.:.|.|:.. ..||:            |..|.||.|.:|   |..||       .||
  Fly   433 SPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTPTLGDP 497

  Fly   599 APQQQQQQQQQQQQLLNGRPS 619
            ||||:.|.|||:||..|  ||
  Fly   498 APQQELQSQQQEQQHQN--PS 516

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	40/74 (54%)
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	40/73 (55%)