Protein Alignment SoxN and hmgb3

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001004888.1
• Gene: hmgb3 / 448228
• XenbaseID: XB-GENE-1002014
• Length: 202
• Species: Xenopus tropicalis
• Alignment Length: 97
• Identity: 27/97 - (27%)
• Similarity: 55/97 - (56%)
• Gaps: 4/97 - (4%)

  Fly   171 KNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRL 235
            |.::..:..|||.:.|.::....|.|:.|.||.:...:::|:||..|.:|::.||:|:.::|.:|
 Frog    85 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKL 149

  Fly   236 RAVHMKEHPDYKYRPR----RKTKTLTKTKEK 263
            :..:.|:..|||.:.:    :....|.:.||:
 Frog   150 KEKYEKDVADYKSKGKFDCAKGAPKLARKKEE 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	23/70 (33%)
hmgb3	NP_001004888.1	HMG-box	13..78	CDD:381793
		HMG_box	93..160	CDD:366139	20/66 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920