Protein Alignment SoxN and sox1a

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001002483.1
• Gene: sox1a / 436756
• ZFINID: ZDB-GENE-040718-186
• Length: 336
• Species: Danio rerio
• Alignment Length: 414
• Identity: 154/414 - (37%)
• Similarity: 194/414 - (46%)
• Gaps: 127/414 - (30%)

  Fly   157 GGSSNNN------NNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGA 215
            |..:|.|      |:.:.||:     ||||||||||||||||||||||.:|||||||||||||||
Zfish    14 GPQTNTNPGQTGPNSGSKANQ-----DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGA 73

  Fly   216 QWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGLMPGQTVGGGA 279
            :||.:||:||||||||||||||:|||||||||||||||||||.| |:||.: |||:     ||..
Zfish    74 EWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLK-KDKYSLAGGLL-----GGAG 132

  Fly   280 PGEPVTPTRVQGQPGQN-QSLNGSGGSAAA-----------------AAAAAAAAAQQARQDMYQ 326
            .|..::|..|    ||. :|..|.|.||:|                 ||||||||..|..|..|.
Zfish   133 GGVGMSPAGV----GQRLESPGGHGSSASAGYAHMNGWANGTYSGQVAAAAAAAAMMQEAQLAYS 193

  Fly   327 MNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSS 391
            .:..:|    .:..||              .|:........|.|:.....|..:|..|:  |.|:
Zfish   194 QHPGSG----SHHHHA--------------HHHHPHNPQPMHRYDMTALQYSPISNSQS--YMSA 238

  Fly   392 LQQPGSPSPYGGSSLQQQPGS--PTPYGGGGGGGGQVSCQSHSPSDSSIKSEP-VSPSPSAIALN 453
                 |||.|||.|..|...|  .||...|             ...|.:|||| :||..:.
Zfish   239 -----SPSGYGGISYTQHQNSSVATPAAIG-------------TLSSLVKSEPNISPPVTT---- 281

  Fly   454 NNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQ 518
                          :|.....            |:|..:::|| ||..       ::..|.:|.:
Zfish   282 --------------HSRGPCP------------GDLREMISMY-LPTG-------ESGDPSVQSR 312

  Fly   519 HQSMQQQQQH--------LPQQHL 534
            ..::.|..|.        :|..|:
Zfish   313 LHALPQHYQSTTAGVNGTVPLTHI 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	63/70 (90%)
sox1a	NP_001002483.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..39		9/29 (31%)
		SOX-TCF_HMG-box	36..107	CDD:238684	63/70 (90%)
		SOXp	106..>194	CDD:289133	41/97 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	193..216		4/40 (10%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170596257
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	5.840