Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261829.1 | Gene: | Sox21b / 39569 | FlyBaseID: | FBgn0042630 | Length: | 587 | Species: | Drosophila melanogaster |
Alignment Length: | 594 | Identity: | 197/594 - (33%) |
---|---|---|---|
Similarity: | 243/594 - (40%) | Gaps: | 196/594 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 HH---TSAALHGHAASPYSALAPLMNLGQSHLTH-SQLS-HHNHHHHHMSAHIAASQSPNPLSSL 79
Fly 80 QSSMANTLNGSQVG-------------------QQQQQ----QQQQQSSPLHSSSELSPTQSSIG 121
Fly 122 SHHMTS-PVSHQQHTQQQQHGQQQHLGAGSA--LSSLTGGSSN---------------------- 161
Fly 162 ------------------NNNNSA------------TANKNQQHADRVKRPMNAFMVWSRGQRRK 196
Fly 197 MASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTK 261
Fly 262 EKYPM----------------GGLMPGQTVG----GGAPGEPVTPTRVQGQPGQNQSLNGSGGSA 306
Fly 307 AAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAG-AAAYQTSYMGQHYAAQ-RYDMGHM 369
Fly 370 YNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPS 434
Fly 435 DSS-------------IKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAA--------AAA 478
Fly 479 AAAAAAGGG 487 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 60/70 (86%) |
Sox21b | NP_001261829.1 | SOX-TCF_HMG-box | 247..318 | CDD:238684 | 61/73 (84%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45451315 | |
Domainoid | 1 | 1.000 | 49 | 1.000 | Domainoid score | I4418 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 136 | 1.000 | Inparanoid score | I3128 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1275 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.840 |