Protein Alignment SoxN and hmgb2

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_988904.1
• Gene: hmgb2 / 394499
• XenbaseID: XB-GENE-1000246
• Length: 212
• Species: Xenopus tropicalis
• Alignment Length: 113
• Identity: 28/113 - (24%)
• Similarity: 54/113 - (47%)
• Gaps: 12/113 - (10%)

  Fly   171 KNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRL 235
            |.::..:..|||.:||.::....|.::.|::|.:...:.:|:||..|.:.:..:|.|:..:|.:|
 Frog    88 KKKKDPNAPKRPPSAFFLFCSEHRPQIKSESPGLSIGDTAKKLGEMWSEQTPKDKLPYEQKAAKL 152

  Fly   236 RAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEP 283
            :..:.|:...|            |.|.|..:|..:||:..|.....||
 Frog   153 KEKYEKDVAAY------------KAKGKSDVGKKVPGRPTGSKKKAEP 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	18/70 (26%)
hmgb2	NP_988904.1	HMG_box_2	6..78	CDD:370242
		HMG_box	96..163	CDD:366139	17/66 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920