Protein Alignment SoxN and sox4b

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_957195.1
• Gene: sox4b / 393875
• ZFINID: ZDB-GENE-040426-1274
• Length: 342
• Species: Danio rerio
• Alignment Length: 319
• Identity: 94/319 - (29%)
• Similarity: 143/319 - (44%)
• Gaps: 67/319 - (21%)

  Fly   145 HLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEI 209
            |..:.|..|:.:||...|.....||      :..:|||||||||||:.:|||:...:|.|||:||
Zfish    27 HAASPSPGSTASGGEKLNPGWCKTA------SGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEI 85

  Fly   210 SKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTL-TKTKEKYPMGGLMPGQ 273
            |||||.:||.|.:.:|.|||.||:|||..||.::||||||||:|.|:. :|..||..:
Zfish    86 SKRLGKRWKLLKDGDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSSGSKPSEKLSI------- 143

  Fly   274 TVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQA---RQDMYQMNAPNGYMP 335
                   .:|.:..|..|:|.:.:.  |.....:...|.||...:|:   ::.:|..::.:.  |
Zfish   144 -------SKPSSKKRSAGKPHKKEP--GPADHHSLYKAKAAPVVKQSPEKKKRLYIFSSSSS--P 197

  Fly   336 NGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSG-----GQTSPYGSSLQQP 395
            :...:.|.|..:::..||                  :..::|:..||     ..|...|||::.|
Zfish   198 SPAAVPASPTLSSSADTS------------------DPLSLYEDASGSGKEDADTRYTGSSMRAP 244

  Fly   396 GSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNN 454
                            ||||.........|.|..|....|........||...:::|.:
Zfish   245 ----------------SPTPSAAHSSSSSQFSSSSDEEPDDDALDANTSPGFDSMSLGS 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	43/70 (61%)
sox4b	NP_957195.1	SOX-TCF_HMG-box	54..125	CDD:238684	43/70 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	3.010