Protein Alignment SoxN and sox4a

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_998287.1
• Gene: sox4a / 336346
• ZFINID: ZDB-GENE-030131-8290
• Length: 363
• Species: Danio rerio
• Alignment Length: 325
• Identity: 98/325 - (30%)
• Similarity: 148/325 - (45%)
• Gaps: 49/325 - (15%)

  Fly   142 QQQHLGAGSALSSLTGGSSNNN------NNSATANKNQQHADR------------VKRPMNAFMV 188
            :|.|..:.|:...|.|.|.::.      :.|.|........|:            :|||||||||
Zfish     9 EQTHTSSSSSSDVLPGDSIDSGEMDLDMDASPTPGSPNSAGDKMDIAWCKTPSGHIKRPMNAFMV 73

  Fly   189 WSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRK 253
            ||:.:|||:...:|.|||:|||||||.:||.|.:|:|.|||.||:|||..||.::||||||||:|
Zfish    74 WSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKK 138

  Fly   254 TKTLT-KTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAA 317
            .|:.: ||.||.......||.........:.::.|..:....:..|.:......|...:.:.:||
Zfish   139 VKSSSGKTGEKAERVSASPGAKSASKKSSKTLSRTHRKSTTLELTSHSVPADHHALYKSRSVSAA 203

  Fly   318 QQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSG 382
            :|    :.:..|..|::..|....:.|...|...:..:..  :|:..|...:|.:|.|     ||
Zfish   204 KQ----IPEKPAKRGHVYGGCSTDSSPPSVAVPASPTLSS--SAESSDPLSLYEDGLA-----SG 257

  Fly   383 GQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSP 447
            .:.:...:..:...:|||        .|.:...|          |.|| |.||...:.|...|||
Zfish   258 KEDAEPAARFKYTRAPSP--------TPSASHSY----------SSQS-SSSDEEFEDELADPSP 303

  Fly   448  447
            Zfish   304  303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	44/82 (54%)
sox4a	NP_998287.1	SOX-TCF_HMG-box	63..134	CDD:238684	44/70 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.910