Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019952.1 | Gene: | Sox18 / 311723 | RGDID: | 1311718 | Length: | 377 | Species: | Rattus norvegicus |
Alignment Length: | 302 | Identity: | 90/302 - (29%) |
---|---|---|---|
Similarity: | 137/302 - (45%) | Gaps: | 83/302 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 QQHAD--RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRL 235
Fly 236 RAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLN 300
Fly 301 GSGGSAAAAAAAAAAAAQQARQ------DMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHY 359
Fly 360 AAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQ------PGSP--SPYGGSSLQQQPGSPTPY 416
Fly 417 GGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNI 458 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 38/70 (54%) |
Sox18 | NP_001019952.1 | SOX-TCF_HMG-box | 78..149 | CDD:238684 | 38/70 (54%) |
Sox17_18_mid | 191..239 | CDD:403331 | 7/55 (13%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |