Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571362.2 | Gene: | sox17 / 30544 | ZFINID: | ZDB-GENE-991213-1 | Length: | 413 | Species: | Danio rerio |
Alignment Length: | 542 | Identity: | 125/542 - (23%) |
---|---|---|---|
Similarity: | 186/542 - (34%) | Gaps: | 206/542 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 SSPLHSSSELSPTQSSIGSHHMTSPVSHQQHTQQQQHGQQQHLGAGSA-----LSSLTGGSSNNN 163
Fly 164 NNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 228
Fly 229 IDEAKRLRAVHMKEHPDYKYRPRRK--TKTLTKTKEKYPMGGL--------MPGQTVGGGAPGEP 283
Fly 284 VTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAA 348
Fly 349 AYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSP 413
Fly 414 TPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAA 478
Fly 479 AAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQ-HQSMQQQQQHLPQQHL-------- 534
Fly 535 -SQQHQQIPQ-----------QHHTMQQQQQQH----HLQHQQSLRAMAPLAHMXEMASAYGAAG 583
Fly 584 SSVS------------VSPPLP 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 39/70 (56%) |
sox17 | NP_571362.2 | SOX-TCF_HMG-box | 62..133 | CDD:238684 | 39/70 (56%) |
Sox_C_TAD | 186..411 | CDD:288887 | 54/331 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |