Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100459.1 | Gene: | Sox8 / 302993 | RGDID: | 1309072 | Length: | 463 | Species: | Rattus norvegicus |
Alignment Length: | 487 | Identity: | 121/487 - (24%) |
---|---|---|---|
Similarity: | 168/487 - (34%) | Gaps: | 175/487 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 179 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEH 243
Fly 244 PDYKYRPRRKTKTLTKTKEK--------YPMGGLMPGQTVGG-------------GAPGEPVTPT 287
Fly 288 RVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQ-----------------ARQDMYQMNAPNGYMP 335
Fly 336 -NGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPS 399
Fly 400 PYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIM 464
Fly 465 KREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHL 529
Fly 530 PQQHLSQQHQQIPQQHHTMQQQQQQHHLQHQQSLRAMAPLAHMXEMASAYGAAGSSVSVSPPLPP 594
Fly 595 YMPTAPQQQQQQQQQQQQLLNGRPSPTASGSS 626 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 45/69 (65%) |
Sox8 | NP_001100459.1 | Sox_N | 18..86 | CDD:403592 | |
SOX-TCF_HMG-box | 98..168 | CDD:238684 | 44/68 (65%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 151 | 1.000 | Inparanoid score | I4278 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.860 |