Protein Alignment SoxN and sox19a

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_570983.2
• Gene: sox19a / 30038
• ZFINID: ZDB-GENE-980526-102
• Length: 297
• Species: Danio rerio
• Alignment Length: 429
• Identity: 138/429 - (32%)
• Similarity: 179/429 - (41%)
• Gaps: 147/429 - (34%)

  Fly   119 SIGSHHMTS--PVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHA---DR 178
            |:..|.|.|  |.:||               :...::.|.||.::.:...|..::.||.:   |:
Zfish     3 SMLEHDMKSAVPPTHQ---------------SAQGMTQLNGGVTHGSAKPAVNSQQQQSSDPMDK 52

  Fly   179 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEH 243
            ||||||||||||||||||||.:|||||||||||||||:||.|:::||||||||||||||:||||:
Zfish    53 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEY 117

  Fly   244 PDYKYRPRRKTKTLTKTKE---KYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGS 305
            |||||:||||||.:.|...   |||:                                   |.|:
Zfish   118 PDYKYKPRRKTKPVLKKDNPAAKYPL-----------------------------------SAGN 147

  Fly   306 AAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHM- 369
            ..|||||..:.. ..|.|.|......||              ...||..:|......|||:..:
Zfish   148 LLAAAAAQGSGG-SPRMDSYGWGHTGGY--------------PGMQTDALGYSQQLHRYDLSALQ 197

  Fly   370 YNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPS 434
            |.:..|..||...|..| |          :|...||..|||                     ||.
Zfish   198 YPSAMATAQTYMNGANS-Y----------NPMSYSSTPQQP---------------------SPV 230

  Fly   435 DSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLP 499
            .|.:|.|.||.||:....:....:.                           |:|..:::|| :|
Zfish   231 MSMVKPEQVSHSPTGAHSHQRGPLQ---------------------------GDLRDMISMY-IP 267

  Fly   500 DEQRHLLHYQTDSPDLQQQHQSMQQQQQHL----PQQHL 534
            .         .|:.|...|......||.:|    |..|:
Zfish   268 G---------GDTTDSGAQRGYSNIQQHYLTGTAPLTHI 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	60/70 (86%)
sox19a	NP_570983.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..52		13/63 (21%)
		SOX-TCF_HMG-box	52..123	CDD:238684	60/70 (86%)
		SOXp	122..>187	CDD:289133	26/114 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..255		14/56 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.010