Protein Alignment SoxN and Sox6

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_038962229.1
• Gene: Sox6 / 293165
• RGDID: 1309000
• Length: 855
• Species: Rattus norvegicus
• Alignment Length: 496
• Identity: 119/496 - (23%)
• Similarity: 175/496 - (35%)
• Gaps: 196/496 - (39%)

  Fly    30 AASPYSALAPLMNLGQSHLTHSQLS------------------H---HNHHHHHM----SAHIAA 69
            ||:..|.|:|| .|.:.|::|.|::                  |   |:::|..:    :|.:|:
  Rat   341 AAAAASGLSPL-QLQKGHVSHPQINPRLKGISDRLGRNLDPYEHGGGHSYNHKQIEQLYAAQLAS 404

  Fly    70 SQ---------SPNPLSSLQSSMANTLNGSQVGQQ--QQQQQQQQSSPLHSSSE----------L 113
            .|         :|.|.:|..:.....:...:.|..  .|.:.:..:.||:.||.          .
  Rat   405 MQVSPGAKMPSTPQPPNSAGAVSPTGIKNEKRGTSPVTQVKDETTAQPLNLSSRPKTAEPVKSPT 469

  Fly   114 SPTQSSIGSHHMTSPV----------------------------------------------SHQ 132
            |||||...: ..||||                                              :.:
  Rat   470 SPTQSLFPA-SKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARK 533

  Fly   133 QHTQQQQHGQQQHLGAGSALSS------------------------LTGGSSNNN---------- 163
            ...|.|:..|||..|....|||                        |||.||.:.
  Rat   534 MREQIQREQQQQPHGVDGKLSSMNSMGLSNCRNEKERTRFENLGPQLTGKSSEDGKLGPGVIDLT 598

  Fly   164 -----------NNSATANKNQQH-------------------------ADRVKRPMNAFMVWSRG 192
                       |.||.  |.||:                         ...:||||||||||::.
  Rat   599 RPEDAEGSKAMNGSAA--KLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKD 661

  Fly   193 QRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTL 257
            :|||:....|.||||.|||.||::||.:|..||:|:.:|..||..:|::::|:|||:||.| :|.
  Rat   662 ERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPK-RTC 725

  Fly   258 TKTKEKYPMG---GLMPGQ--------TVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAA 311
            ....:|..:|   .||..:        || |..|..|:|.......||             |...
  Rat   726 IVDGKKLRIGEYKQLMRSRRQEMRQFFTV-GQQPQIPITTGTGVVYPG-------------AITM 776

  Fly   312 AAAAAAQQARQDMYQMNA-PNGYMP---NGYMMHADPAGAA 348
            |....:.|...|....:| |...:|   :.|.|..|.|..|
  Rat   777 ATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKMDGASLA 817

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	36/70 (51%)
Sox6	XP_038962229.1	SOX-TCF_HMG-box	647..718	CDD:238684	36/70 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900