Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038945039.1 | Gene: | Hmgb1 / 25459 | RGDID: | 2802 | Length: | 486 | Species: | Rattus norvegicus |
Alignment Length: | 290 | Identity: | 63/290 - (21%) |
---|---|---|---|
Similarity: | 96/290 - (33%) | Gaps: | 64/290 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 AASPYSALAPLMNLGQSHLTHSQLSHHNHHHHH--MSAHIAASQSPNPLSSLQSSMANTLNGSQV 92
Fly 93 GQQQQQQQQQQSSPLHSSSELSPTQSSIGSHHMTSPVSHQQHTQQ--QQHGQQQHLGAGSALSS- 154
Fly 155 --------------LTGGSSNNNNNSATANKNQQ--------HADRVKRPMNAFMVWSRGQRRKM 197
Fly 198 ASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTK--T 260
Fly 261 KEKYP--------------MGGLMPGQTVG 276 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SoxN | NP_001260269.1 | SOX-TCF_HMG-box | 178..249 | CDD:238684 | 22/70 (31%) |
Hmgb1 | XP_038945039.1 | HMG_box_2 | 277..349 | CDD:401091 | 21/71 (30%) |
HMG_box | 366..433 | CDD:395407 | 6/29 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1641977at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |