Protein Alignment SoxN and Sox21

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_808421.1
• Gene: Sox21 / 223227
• MGIID: 2654070
• Length: 276
• Species: Mus musculus
• Alignment Length: 329
• Identity: 131/329 - (39%)
• Similarity: 146/329 - (44%)
• Gaps: 122/329 - (37%)

  Fly   177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMK 241
            |.|||||||||||||.||||||.:|||||||||||||||:||.|:||||||||||||||||:|||
Mouse     6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMK 70

  Fly   242 EHPDYKYRPRRKTKTLTKTKEKY----PMG----------GLMPGQTVGGGAPGEPVTPTRVQGQ 292
            ||||||||||||.|||.| |:|:    |.|          .|..|..:..||.|..|.
Mouse    71 EHPDYKYRPRRKPKTLLK-KDKFAFPVPYGLGSVADAEHPALKAGAGLHAGAGGGLVP------- 127

  Fly   293 PGQNQSLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQ 357
                :||..:...||||||||||..               :.|......|..|.|||..:.|
Mouse   128 ----ESLLANPEKAAAAAAAAAARV---------------FFPQSAAAAAAAAAAAAAGSPY--- 170

  Fly   358 HYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGG 422
                      .:.:.|..|.:..|.....||.|||                  |.||  .|.|..
Mouse   171 ----------SLLDLGSKMAEISSSSSGLPYASSL------------------GYPT--AGAGAF 205

  Fly   423 GGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGG 487
            .|                                                ||||||||||||||.
Mouse   206 HG------------------------------------------------AAAAAAAAAAAAGGH 222

  Fly   488 ELNH 491
            ..:|
Mouse   223 THSH 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	66/74 (89%)
Sox21	NP_808421.1	HMG-box_SoxB	6..85	CDD:438790	69/78 (88%)
		SOXp	77..>95	CDD:463537	12/18 (67%)