DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoxN and Sox7

DIOPT Version :9

Sequence 1:NP_001260269.1 Gene:SoxN / 44275 FlyBaseID:FBgn0029123 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_035576.1 Gene:Sox7 / 20680 MGIID:98369 Length:380 Species:Mus musculus


Alignment Length:510 Identity:116/510 - (22%)
Similarity:172/510 - (33%) Gaps:199/510 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKE 242
            |::|||||||||::.:|:::|..||.:||:|:||.||..||.|:.|:|||::|||:|||..||::
Mouse    44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQD 108

  Fly   243 HPDYKYRPRRKT--KTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGS 305
            :|:||||||||.  |.|.|..:        ||..:...:..:...|.:           ||.|  
Mouse   109 YPNYKYRPRRKKQGKRLCKRVD--------PGFLLSSLSRDQNTLPEK-----------NGIG-- 152

  Fly   306 AAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMY 370
                        :..::|..:. :|...:|..:..:.:  ||||...|.                
Mouse   153 ------------RGEKEDRGEY-SPGATLPGLHSCYRE--GAAAAPGSV---------------- 186

  Fly   371 NNGYAMYQTVSGGQTSPYGSSLQQPGSPSP---------YGGSSLQQQPGSPTPYGGGGGGGGQV 426
                         .|.|||  |..|...||         :..||.|::.|.|             
Mouse   187 -------------DTYPYG--LPTPPEMSPLDALEPEQTFFSSSCQEEHGHP------------- 223

  Fly   427 SCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNH 491
               .|.|   .:...|.||                     |::.:....:....:.|.|      
Mouse   224 ---HHLP---HLPGPPYSP---------------------EFTPSPLHCSHPLGSLALG------ 255

  Fly   492 LMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQHQQIPQQHHTMQQQQQQHH 556
                               .||.:     ||.......|.......|......|..:|       
Mouse   256 -------------------QSPGV-----SMMSSVSGCPPSPAYYSHATYHPLHPNLQ------- 289

  Fly   557 LQHQQSLRAMAPLAHMXEMASAYGAAGSSVSVSPPLPPYMPTAPQQQQ------QQQQQQQQLLN 615
                         ||: :::            .||..|...|..|..|      ..:.:..|.||
Mouse   290 -------------AHLGQLS------------PPPEHPGFDTLDQLSQVELLGDMDRNEFDQYLN 329

  Fly   616 GRPSPTASGSSGGRSSAHSSGHTAAHSPALAAAYQLTPSAATSSATSAAAAAATA 670
                     :.|...||...|....|.|    ..|.||:..|.::..:..|.|||
Mouse   330 ---------TPGHPDSAAGVGTLTGHVP----LSQGTPTGPTETSLISVLADATA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoxNNP_001260269.1 SOX-TCF_HMG-box 178..249 CDD:238684 39/70 (56%)
Sox7NP_035576.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43
SOX-TCF_HMG-box 44..115 CDD:238684 39/70 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..167 6/53 (11%)
Sox_C_TAD 175..378 CDD:288887 59/345 (17%)
Required for beta-catenin-binding 323..328 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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