Protein Alignment SoxN and Sox5

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_006506994.1
• Gene: Sox5 / 20678
• MGIID: 98367
• Length: 792
• Species: Mus musculus
• Alignment Length: 443
• Identity: 105/443 - (23%)
• Similarity: 166/443 - (37%)
• Gaps: 118/443 - (26%)

  Fly     9 KGSLLHATMPPH-HTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAHIAASQS 72
            :|:|..|..|.. ||..:.:.........:|..:||.....|....|..:....||.| :..:..
Mouse   391 QGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPASPTSPHMPA-LRINSG 454

  Fly    73 PNPL-SSLQSSMAN-TLNGSQVG------------QQQQQQQQQQSSPLHSSSELSPTQSSIGSH 123
            ..|| :|:.:::|: :...|.:|            |:.:|.::|......:........:|||..
Mouse   455 AGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQALDGKVAVVNSIGLS 519

  Fly   124 H------------MTSPVSHQQHTQQQ-QHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQH 175
            :            :|..::.:|:.:.: .||......:|.:..|.....|.....|.....|:.|
Mouse   520 NCRTEKEKTTLESLTQQLAVKQNEEGKFSHGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPH 584

  Fly   176 ADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHM 240
               :||||||||||::.:|||:....|.||||.|||.||::||.::..||:|:.:|..||...|:
Mouse   585 ---IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHL 646

  Fly   241 KEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGS 305
            :::|||||:||.|...|...|:      |..|:
Mouse   647 EKYPDYKYKPRPKRTCLVDGKK------LRIGE-------------------------------- 673

  Fly   306 AAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMY 370
                   ..|..:..||:|.|      |...|.......|.|                   |.:|
Mouse   674 -------YKAIMRNRRQEMRQ------YFNVGQQAQIPIATA-------------------GVVY 706

  Fly   371 NNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSP---TPYGGGG 420
            .:..||     .|..||:        .||.:...|...:||.|   :.||..|
Mouse   707 PSAIAM-----AGMPSPH--------LPSEHSSVSSSPEPGMPVIQSTYGAKG 746

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	36/70 (51%)
Sox5	XP_006506994.1	SOX-TCF_HMG-box	584..655	CDD:238684	37/73 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900