Protein Alignment SoxN and Sox3

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_033263.2
• Gene: Sox3 / 20675
• MGIID: 98365
• Length: 450
• Species: Mus musculus
• Alignment Length: 366
• Identity: 142/366 - (38%)
• Similarity: 176/366 - (48%)
• Gaps: 54/366 - (14%)

  Fly   148 AGSALSSLTGGSSNNNNNSATAN-------KNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMH 205
            ||.:.::..||::..|..|..||       ......||||||||||||||||||||||.:|||||
Mouse   106 AGKSGANPAGGANAGNGGSGGANGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMH 170

  Fly   206 NSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGL 269
            ||||||||||.||.|:::|||||||||||||||||||:||||||||||||||.| |:||.: |||
Mouse   171 NSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLK-KDKYSLPGGL 234

  Fly   270 MPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQ-----ARQDMYQMNA 329
            :|                              .|.:||||||||||||..     .|.|.|  ..
Mouse   235 LP------------------------------PGAAAAAAAAAAAAAASSPVGVGQRLDTY--TH 267

  Fly   330 PNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQ 394
            .||:....|.:..:..|.|  |...|............|.|:.....|..:.......|.::...
Mouse   268 VNGWANGAYSLVQEQLGYA--QPPSMSSPPPPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAA 330

  Fly   395 PGSPSPYGGSSLQQQPGSPTPYG----GGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNN 455
            ..:.|.|||.:......:...||    .........:..|..|..|.:||||.||.|:..:.:..
Mouse   331 AAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQR 395

  Fly   456 NNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMY 496
            ..:.:...|...|  ......||.||:...||.|:.:...|
Mouse   396 ACLGDLRDMISMY--LPPGGDAADAASPLPGGRLHGVHQHY 434

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	62/70 (89%)
Sox3	NP_033263.2	SOX-TCF_HMG-box	143..214	CDD:238684	62/70 (89%)
		SOXp	213..306	CDD:289133	42/127 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X927
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.910