Protein Alignment SoxN and sox-4

DIOPT Version :9

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001335567.1
• Gene: sox-4 / 182547
• WormBaseID: WBGene00015716
• Length: 260
• Species: Caenorhabditis elegans
• Alignment Length: 226
• Identity: 77/226 - (34%)
• Similarity: 108/226 - (47%)
• Gaps: 48/226 - (21%)

  Fly    48 LTHSQLSHHN-HHHHHMSAHIAASQ-------SPN--PLSSLQSSMANTLNGSQVGQQQQQQQQQ 102
            |:|...|..| :.....:..|||:.       |||  ....|.:.||...:..||     .....
 Worm     2 LSHPYASAFNLYSQARKTTPIAAASSVSCPIVSPNMDATQKLLAIMATVKSFEQV-----NDSDG 61

  Fly   103 QSSPLHSSSELSPTQSSIGSHHMTSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSA 167
            .|||   ||..|||:|       .:.:|..|               .|.::.:.|...|.|:...
 Worm    62 LSSP---SSPESPTES-------PNVISSVQ---------------ASTIADIIGHYVNGNSIKD 101

  Fly   168 TANKNQQHAD--------RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESE 224
            ..|.:|:.|.        |:|||||||||||:.:|:::|:...|.|||:|||.|||:|:.:.|.|
 Worm   102 VVNSSQKSASQPRTAREPRIKRPMNAFMVWSQQRRQQIAATGQKFHNSDISKMLGAEWRKMEEHE 166

  Fly   225 KRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK 255
            |.||::.||:||..|...||||.|||||:.:
 Worm   167 KVPFVERAKQLREEHFNAHPDYVYRPRRRKR 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	SOX-TCF_HMG-box	178..249	CDD:238684	39/70 (56%)
sox-4	NP_001335567.1	SOX-TCF_HMG-box	120..191	CDD:238684	39/70 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910