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Protein Alignment SoxN and hmg-1.1
DIOPT Version :9
Sequence 1: | NP_001260269.1 |
Gene: | SoxN / 44275 |
FlyBaseID: | FBgn0029123 |
Length: | 761 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001370073.1 |
Gene: | hmg-1.1 / 175081 |
WormBaseID: | WBGene00001971 |
Length: | 95 |
Species: | Caenorhabditis elegans |
Alignment Length: | 82 |
Identity: | 21/82 - (25%) |
Similarity: | 35/82 - (42%) |
Gaps: | 16/82 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 167 ATANKNQQHADRV------------KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKD 219
|.|.|......|| ||.|:||..|.:..|.:: ..|.|..::::|..|.:|..
Worm 4 AAAGKKASPVKRVKKGGKAKDPNAPKRAMSAFFFWMQENRERI--KKPGMGVADVAKAAGVEWGK 66
Fly 220 LSESEK--RPFIDEAKR 234
|::..: :...|:.||
Worm 67 LTDKSRWEKKAADDKKR 83
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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