Protein Alignment SoxN and sox32

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_571926.1
• Gene: sox32 / 116990
• ZFINID: ZDB-GENE-011026-1
• Length: 307
• Species: Danio rerio
• Alignment Length: 252
• Identity: 72/252 - (28%)
• Similarity: 117/252 - (46%)
• Gaps: 29/252 - (11%)

  Fly   123 HHMTSPVSHQQHTQQQQHGQQQ---HLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMN 184
            |....|...|.|..|.|:.:|:   |..|...||.::.||   .::.::.........||:||:|
Zfish    14 HTTRMPEIQQCHYLQHQNDEQRRTAHCPASGPLSPVSVGS---ESSCSSPEAKAPVETRVRRPLN 75

  Fly   185 AFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYR 249
            ||::|::.:||::|..||.:.|:::||.||..||.:|.::|||::.||:|||..|..::|:||||
Zfish    76 AFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMSLADKRPYMQEAERLRIQHTIDYPNYKYR 140

  Fly   250 PRRKTKTLTKTKEKYPMGGLM--PGQTVG------GGAPGEPVTPTRVQGQPGQNQSLNGSGGSA 306
            |||  :...|...|.|....:  |..|..      |.||..|.........|....|....  |:
Zfish   141 PRR--RKCNKRSSKMPSSENVSSPNATFDLSYMFQGQAPQRPYNQINSYRLPHNGFSFENH--SS 201

  Fly   307 AAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQR 363
            :....|.:::..........||..|.::|.           :||..|.:...::.|:
Zfish   202 SYHFEATSSSGNVFHGGATSMNLSNVHLPR-----------SAYSESLLYSQHSVQQ 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	36/74 (49%)
sox32	NP_571926.1	HMG-box_SoxF	69..144	CDD:438841	38/76 (50%)